| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is livM [H]
Identifier: 227828703
GI number: 227828703
Start: 2285401
End: 2286447
Strand: Direct
Name: livM [H]
Synonym: M1425_2461
Alternate gene names: 227828703
Gene position: 2285401-2286447 (Clockwise)
Preceding gene: 227828702
Following gene: 227828704
Centisome position: 87.6
GC content: 37.73
Gene sequence:
>1047_bases ATGGCAGTAGATATTTCCTCTCTTATTTTAGCCATAGTCTTAGACTTCTCAGTATATTTGATGGTTGTAATATCATTAAA TGTAGAAATAGGATTAACTGGAGTTCCAAATTTTGGTAGAGTCCTAGCGTATGCTGGAGGAGCATTCATAGCTGGAGCAA TACCGGGAAGGATTTTACAGCTAATATATGGACTTCACAGTGATTATATTCTTAATAATCCCTCTGTAATAGCAGAGATA AACGATAAATTGCTTCAACAACCGTTAATGGCTCTTGCAATTTTAATTCTTACCCTAATTCTAGCAGGGATAGTTGGGGC GGCCTTAGGTTATATTTCATCTTATCCTGCTTTGAGATTAAGAGAGGATTACCTGGGAATACTATTATTGGTAGCTGGGA CTTCACTGGTAGTAATAGGGATTACTTACCCACCAATAGTGGGAGGCACAGTAGGTGTTCAAGTTCCCGCTGTATTTAAC GCACTTCTAGGTCAAGGATCTAGCTTATATTATAAGATATCAATAGTGTTGTTAGCATTTTCATTAGTGATGCTTCTTCT ATTCAACTTAACATCGAACTCCCCAATGGGAAGAGCGTTCAGAGCAGTCAGAGAAAATGAGGATCTAGTAGAAGTTCTAG GTAGAGATATAGGTGTAATCAGAGGTAAGGCAATGGCATTAGGGGGATTTCTAGCGGGCATAGCAGGATCGCTTTACGCT TTTTATATAGGGTCAGTATTTGCAGGTGCATTCGATAATTTAACGTGGTCATTTAACCCATATTTAATGTTAGTATTGGG AGGTGCAGGGACTTCAATAGGCGCAATGCTAGGAGCACTAATATATTCCACCTTATATCACGTTATCGATTTGTACAAAC AAACAATAGGGTATTATCTGCATTTCGATGCAGTATGGCTACAATATATGTTATTTGGACTTATACTAACAATAATCCTT ATAATACGACCTCAAGGTATTGTCGTAGAAAAAGCTAAGCCATTAGTAAAACCGAAAGCTAAGGATGAGGAAAAACTAAC TAGGTAA
Upstream 100 bases:
>100_bases CTTTCGTTATCAACCAATACTCAACGTTAGTACCACTCATAGTAGTTGCAGCAGTTCTCTTAATAGCGCCAAATGGGATT ATGGGAATAAGGGTGAAATA
Downstream 100 bases:
>100_bases AGAGAGATTTTTCTGGTTATAAGTTATCTGATACCGTTCATAAAACGCGGGGCGAAGTTTCTATAGATTAAGGGCATCAA ATGAAAACCAGACCGAATCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAVDISSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQLIYGLHSDYILNNPSVIAEI NDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRLREDYLGILLLVAGTSLVVIGITYPPIVGGTVGVQVPAVFN ALLGQGSSLYYKISIVLLAFSLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGIAGSLYA FYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHVIDLYKQTIGYYLHFDAVWLQYMLFGLILTIIL IIRPQGIVVEKAKPLVKPKAKDEEKLTR
Sequences:
>Translated_348_residues MAVDISSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQLIYGLHSDYILNNPSVIAEI NDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRLREDYLGILLLVAGTSLVVIGITYPPIVGGTVGVQVPAVFN ALLGQGSSLYYKISIVLLAFSLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGIAGSLYA FYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHVIDLYKQTIGYYLHFDAVWLQYMLFGLILTIIL IIRPQGIVVEKAKPLVKPKAKDEEKLTR >Mature_347_residues AVDISSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQLIYGLHSDYILNNPSVIAEIN DKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRLREDYLGILLLVAGTSLVVIGITYPPIVGGTVGVQVPAVFNA LLGQGSSLYYKISIVLLAFSLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGIAGSLYAF YIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHVIDLYKQTIGYYLHFDAVWLQYMLFGLILTIILI IRPQGIVVEKAKPLVKPKAKDEEKLTR
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=363, Percent_Identity=25.068870523416, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 37349; Mature: 37218
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDISSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQ CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCHHHHHCCHHHHHH LIYGLHSDYILNNPSVIAEINDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRL HHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH REDYLGILLLVAGTSLVVIGITYPPIVGGTVGVQVPAVFNALLGQGSSLYYKISIVLLAF HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHH SLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGIAGSLYA HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH FYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHVIDLYKQTIGYYL HHHHHHHHHHHCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFDAVWLQYMLFGLILTIILIIRPQGIVVEKAKPLVKPKAKDEEKLTR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCC >Mature Secondary Structure AVDISSLILAIVLDFSVYLMVVISLNVEIGLTGVPNFGRVLAYAGGAFIAGAIPGRILQ CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCHHHHHCCHHHHHH LIYGLHSDYILNNPSVIAEINDKLLQQPLMALAILILTLILAGIVGAALGYISSYPALRL HHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH REDYLGILLLVAGTSLVVIGITYPPIVGGTVGVQVPAVFNALLGQGSSLYYKISIVLLAF HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHH SLVMLLLFNLTSNSPMGRAFRAVRENEDLVEVLGRDIGVIRGKAMALGGFLAGIAGSLYA HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH FYIGSVFAGAFDNLTWSFNPYLMLVLGGAGTSIGAMLGALIYSTLYHVIDLYKQTIGYYL HHHHHHHHHHHCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFDAVWLQYMLFGLILTIILIIRPQGIVVEKAKPLVKPKAKDEEKLTR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]