| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is yjjN [C]
Identifier: 227828675
GI number: 227828675
Start: 2256519
End: 2257451
Strand: Direct
Name: yjjN [C]
Synonym: M1425_2432
Alternate gene names: 227828675
Gene position: 2256519-2257451 (Clockwise)
Preceding gene: 227828674
Following gene: 227828676
Centisome position: 86.5
GC content: 39.12
Gene sequence:
>933_bases ATGAAAGCGGCTATTCTCACACAGTTTAACTCACCTTTTGTTATAGGTAACGCTGAGCCTAAAGGGGTTGGAGTTAAAGT AAATGTAGCATATGCTGGAATATGCGGAAGAGATCTAGTTATATGGAAGGGTGGATTTAAAAACCTTAAATTGCCCTTAA TCTTAGGACATGAAATAGTAGGCTACTATAAGGGAAGACCTGTGGCGGTTTATCCAAACCTGAATTGCGGAAGCTGTGAG TACTGCAAAAGTGGGAAGGAGAATCTGTGCGACAATGCTAGAATTTTAGGAGAAGGAGAGATAACTGGAGGGTATGCTGA GGAGGTTATAATTCCAGAAAGAAACATTATACCATTACCAGACGATAAATTAGAAAAATACGCCGCAACCATGGACCCCG TAGCAACTGCAATTCACGCAACTAAGCTTGCAAATTTAAATAGAGATAGTAAAGTTTTAGTAACTGGTGCAGGTGGAGGA GTGGGTATTCATCTCGTACAATATTTGAAATATTTCGGTATTTCTAGTGTTTATGGGCTATCGTCTAAAGGGGAAAAGCT ACAAGAATTGGGAGTAACGCCCATTAGTGATATAAGAAGTGAGAAGTTTGATACAATATTTGAGCTGGTAGGCTCTAAAA CAATAAACGATTCCTTGAGGGCACTAAAGAAGGAGGGTACTCTAGTTTTGATAGGAAATACTGAAGGCGAGCCAATAACG TTGTTAAGGCCAGCCATGACTATAATGAGACAACAAAAAATTATAGGTTCGGCATCTTATACTAAGGCAGAGTACGAGGA GGCTATTAGATTAGTGGGAGAAGGGAAAATAAAAGCGATATATGAGATTTACGAACTAGAGAGGATAAATGAGGCGTATA GGAAAATGATGGAGAGAAAGGTTCTGGGAAGAGCTGTATTAAAGGTAATTTAA
Upstream 100 bases:
>100_bases GATGACGCTTTAGCTGGAAAGATTGAGGATAAGTGTATGTTTGTACCTAAGTCTTTAAGTCAACAATGAATATATTAACA ATCAATTCCCTTTTTAATAC
Downstream 100 bases:
>100_bases CCTTCTTTATACATGTAATTCTCATAAGGTGATAACCTAAATATTATATTTTTACGTTGACCTTTCTTTAATTCATCATG AGTAACGTATTAGTTTTTGA
Product: alcohol dehydrogenase GroES domain protein
Products: NA
Alternate protein names: Acryloyl-CoA reductase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKAAILTQFNSPFVIGNAEPKGVGVKVNVAYAGICGRDLVIWKGGFKNLKLPLILGHEIVGYYKGRPVAVYPNLNCGSCE YCKSGKENLCDNARILGEGEITGGYAEEVIIPERNIIPLPDDKLEKYAATMDPVATAIHATKLANLNRDSKVLVTGAGGG VGIHLVQYLKYFGISSVYGLSSKGEKLQELGVTPISDIRSEKFDTIFELVGSKTINDSLRALKKEGTLVLIGNTEGEPIT LLRPAMTIMRQQKIIGSASYTKAEYEEAIRLVGEGKIKAIYEIYELERINEAYRKMMERKVLGRAVLKVI
Sequences:
>Translated_310_residues MKAAILTQFNSPFVIGNAEPKGVGVKVNVAYAGICGRDLVIWKGGFKNLKLPLILGHEIVGYYKGRPVAVYPNLNCGSCE YCKSGKENLCDNARILGEGEITGGYAEEVIIPERNIIPLPDDKLEKYAATMDPVATAIHATKLANLNRDSKVLVTGAGGG VGIHLVQYLKYFGISSVYGLSSKGEKLQELGVTPISDIRSEKFDTIFELVGSKTINDSLRALKKEGTLVLIGNTEGEPIT LLRPAMTIMRQQKIIGSASYTKAEYEEAIRLVGEGKIKAIYEIYELERINEAYRKMMERKVLGRAVLKVI >Mature_310_residues MKAAILTQFNSPFVIGNAEPKGVGVKVNVAYAGICGRDLVIWKGGFKNLKLPLILGHEIVGYYKGRPVAVYPNLNCGSCE YCKSGKENLCDNARILGEGEITGGYAEEVIIPERNIIPLPDDKLEKYAATMDPVATAIHATKLANLNRDSKVLVTGAGGG VGIHLVQYLKYFGISSVYGLSSKGEKLQELGVTPISDIRSEKFDTIFELVGSKTINDSLRALKKEGTLVLIGNTEGEPIT LLRPAMTIMRQQKIIGSASYTKAEYEEAIRLVGEGKIKAIYEIYELERINEAYRKMMERKVLGRAVLKVI
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the acryloyl- CoA dependent NADPH oxidation and formation of propionyl-CoA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI226510992, Length=299, Percent_Identity=26.7558528428094, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1790718, Length=306, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787863, Length=206, Percent_Identity=31.5533980582524, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1788407, Length=321, Percent_Identity=26.1682242990654, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788073, Length=318, Percent_Identity=25.7861635220126, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786518, Length=329, Percent_Identity=26.7477203647416, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI87081918, Length=304, Percent_Identity=26.9736842105263, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790045, Length=202, Percent_Identity=27.2277227722772, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082401, Length=314, Percent_Identity=26.4331210191083, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71988145, Length=324, Percent_Identity=27.4691358024691, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17562876, Length=316, Percent_Identity=26.2658227848101, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562584, Length=341, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562582, Length=339, Percent_Identity=25.9587020648968, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17562878, Length=182, Percent_Identity=30.2197802197802, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319258, Length=344, Percent_Identity=27.6162790697674, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324486, Length=319, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323961, Length=319, Percent_Identity=27.8996865203762, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319621, Length=322, Percent_Identity=27.9503105590062, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322619, Length=311, Percent_Identity=26.3665594855305, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319955, Length=311, Percent_Identity=26.3665594855305, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=322, Percent_Identity=27.9503105590062, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319257, Length=309, Percent_Identity=24.5954692556634, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323099, Length=312, Percent_Identity=24.6794871794872, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=214, Percent_Identity=32.2429906542056, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI17137530, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.3.1.84 [H]
Molecular weight: Translated: 33915; Mature: 33915
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAILTQFNSPFVIGNAEPKGVGVKVNVAYAGICGRDLVIWKGGFKNLKLPLILGHEIV CCCEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCHHH GYYKGRPVAVYPNLNCGSCEYCKSGKENLCDNARILGEGEITGGYAEEVIIPERNIIPLP HEECCCCEEEECCCCCCCCHHHHCCCHHCCCCCEEEECCCCCCCCCCEEECCCCCEECCC DDKLEKYAATMDPVATAIHATKLANLNRDSKVLVTGAGGGVGIHLVQYLKYFGISSVYGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC SSKGEKLQELGVTPISDIRSEKFDTIFELVGSKTINDSLRALKKEGTLVLIGNTEGEPIT CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCEE LLRPAMTIMRQQKIIGSASYTKAEYEEAIRLVGEGKIKAIYEIYELERINEAYRKMMERK EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLGRAVLKVI HHHHHHHHCC >Mature Secondary Structure MKAAILTQFNSPFVIGNAEPKGVGVKVNVAYAGICGRDLVIWKGGFKNLKLPLILGHEIV CCCEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCHHH GYYKGRPVAVYPNLNCGSCEYCKSGKENLCDNARILGEGEITGGYAEEVIIPERNIIPLP HEECCCCEEEECCCCCCCCHHHHCCCHHCCCCCEEEECCCCCCCCCCEEECCCCCEECCC DDKLEKYAATMDPVATAIHATKLANLNRDSKVLVTGAGGGVGIHLVQYLKYFGISSVYGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC SSKGEKLQELGVTPISDIRSEKFDTIFELVGSKTINDSLRALKKEGTLVLIGNTEGEPIT CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCEE LLRPAMTIMRQQKIIGSASYTKAEYEEAIRLVGEGKIKAIYEIYELERINEAYRKMMERK EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLGRAVLKVI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA