| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is gsiB [H]
Identifier: 227828637
GI number: 227828637
Start: 2218248
End: 2220305
Strand: Direct
Name: gsiB [H]
Synonym: M1425_2390
Alternate gene names: 227828637
Gene position: 2218248-2220305 (Clockwise)
Preceding gene: 227828636
Following gene: 227828638
Centisome position: 85.03
GC content: 36.69
Gene sequence:
>2058_bases ATGAAGTCTCGTAAGGTATTTAAGGGCTTAAGTAGAACCTTTATAGCAATAATTGTTGTTGTAATTGTTGTAATTGGAAT AGCTGTTGGAGTATTATTAGGTAATCACCCATCTAGTAATAATATAAGCACTACTACAACTTCTTCTAATATTATCTCTA CAACTACCCTATCATCAACATCTTCCTCAACATCTACTCCTAATAGTGTTTCAATACCTTCTAGTATTACCGTGGAAGAA GCTGCAACACCAGTAAGTGTAGATCCGGCAAGTAGCTATGATATAGCAGGTGGGGAAATTATTCAGAATGTTTATCAAAC TTTAGTATTTTATAATGGTACTAATACATCTTCCTTTATTGGAGTTTTGGCAGAAAATTGGACTGTAGAGAACAATGGTA CTACTTATATCTTCCATCTATGGCCCTTTATTACTTTCAGTAATGGTAATCCTCTAAACGCTACAGATGTATGGTTTTCA ATATACAGGACGATGCTTATTAATTTAGGTATATCAATTTATACTAGTCAAGCTTTAGCTGTTAATAATGGTCTTGGTTT TGTAGGAAAATTACCCAACGGGAAATACGGTACAATAATGCTACCTAATGGCATACTACAAGCATTAGAGTCTGCTGGAT ATAATTTTTCGTCAAATAAAACTATTGCGATGGAACAAGCTGCATATGATTTGGCATACATTTTATCCCATTTTAATGTA AGCAATACCACAATTCAGAAGGTAATGTCATATCCTCATCAGGCAGTAGTAGTTATCGATCCATATACCGTAGAGTTTAA TTTAGATTACCCATATTCAGCATTTCTAGCTGCTCTTTCCACAAGTACTGGGGCTATAGTAAATCCAGTTTTTGTTGATG AGAATGGCGGAGTTCAAATTGATACTTCTAATACTTATCTTTCCACTCATGCTTTAGGCTCTGGACCCTATATTCTGGAA ACTCCAATAGGAGGGTCTTACGTAGTGCTAAATGCTAGTCCTAACTATTGGGCAAGTAAAGTCCCTACAAAAGATCTAAA TCCGATGTTGGAGACACCTAAGATTAAGACGATAATTATAGATTATCAAACTAACGAGGCAGTAAGAATATTAGACTTAC AGCAAGAGAAGGCACAAATTTCGCAGATTGACGTGATAGACTTACAGGAGCTAATAGGTAGCTCTGGTGTGCAACAACTT CAGAATCTGGTTAATGGAAAGACGTTCCCAACAGCCTATACCAGTGGTAATGTGACAATTTATATTTGGGGGCCTTCAGC ACAAATAGACTTCTTGGCAATAGATGCATATCAATACCCATTTAACATAACAGCAGTAAGATTGGCCATATCACATGCAA TAAACCCTGTACAAATTCAACAACAAGTCTATAAGGGCTTTGCAATAAACTATGTTGGACCTTTAGATCCATCATTACCA TACTATAACTCATCAATAATAGGCTATACGTATAATCCCTCCCTTTCAATACAACTACTAGAAGAAGCAGGATTCAAATT AACACTACCTAATGGAACTACAGTAAATCCAAATGGAAAACCTTTCCCAACAATTACCTTAACATATCAAACTGGTAGTA CAGCTCTACAAGATGAGGCATTACTGGTTCAACAACAGCTAGCTCAAATAGGAATAACAGTTCAGCTAAATCCTGAATCC GCGGTAACAATAGTGGAATCGTATCTAAATCCACCCAATTCATCAGCATATCCTGCCTTCCAATTAGCCGGTAACTTCCC TCCAGTGCTGAGCCCCATAGACCCAGCAATATACTTACTGTCTCAAGCTAGATTACACCACGGAAATCCAGCTTTCGTAG ATAATAGTACGATTAATCAGTTAATCGTAGAGGCTGTAAGAACCAATAACCCCCAGGAATTACAACATATATATAATGAA ATAACTTTACTAACCTTAGCACAAGCACAGTATGTATGGTTAGATGACTTTTTAGCCTATACGGTAGCATCGTCAAGTAT TCATGGATTCTGGTATAGCCCCGGATTAGATGGGTTATTCTATGCTGACTTATACTGA
Upstream 100 bases:
>100_bases ATAGTATTTTAAATAATTTAACTAAGGTCCTTTAAAATTAAAAAGTTTTTTAAGATGAACTAAATAAGGCTTTTTTATTA CTTTTGGAGATAAACTTCTT
Downstream 100 bases:
>100_bases AAAGATAGTGGGGTGTAAATTTCAATATGATTTTTTATAAATTCTTGATTAAGAGAGCTATTGAGGCTTTCTTAGTAATA ATGGCTGAACTTATTATAGT
Product: extracellular solute-binding protein family 5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 685
Protein sequence:
>685_residues MKSRKVFKGLSRTFIAIIVVVIVVIGIAVGVLLGNHPSSNNISTTTTSSNIISTTTLSSTSSSTSTPNSVSIPSSITVEE AATPVSVDPASSYDIAGGEIIQNVYQTLVFYNGTNTSSFIGVLAENWTVENNGTTYIFHLWPFITFSNGNPLNATDVWFS IYRTMLINLGISIYTSQALAVNNGLGFVGKLPNGKYGTIMLPNGILQALESAGYNFSSNKTIAMEQAAYDLAYILSHFNV SNTTIQKVMSYPHQAVVVIDPYTVEFNLDYPYSAFLAALSTSTGAIVNPVFVDENGGVQIDTSNTYLSTHALGSGPYILE TPIGGSYVVLNASPNYWASKVPTKDLNPMLETPKIKTIIIDYQTNEAVRILDLQQEKAQISQIDVIDLQELIGSSGVQQL QNLVNGKTFPTAYTSGNVTIYIWGPSAQIDFLAIDAYQYPFNITAVRLAISHAINPVQIQQQVYKGFAINYVGPLDPSLP YYNSSIIGYTYNPSLSIQLLEEAGFKLTLPNGTTVNPNGKPFPTITLTYQTGSTALQDEALLVQQQLAQIGITVQLNPES AVTIVESYLNPPNSSAYPAFQLAGNFPPVLSPIDPAIYLLSQARLHHGNPAFVDNSTINQLIVEAVRTNNPQELQHIYNE ITLLTLAQAQYVWLDDFLAYTVASSSIHGFWYSPGLDGLFYADLY
Sequences:
>Translated_685_residues MKSRKVFKGLSRTFIAIIVVVIVVIGIAVGVLLGNHPSSNNISTTTTSSNIISTTTLSSTSSSTSTPNSVSIPSSITVEE AATPVSVDPASSYDIAGGEIIQNVYQTLVFYNGTNTSSFIGVLAENWTVENNGTTYIFHLWPFITFSNGNPLNATDVWFS IYRTMLINLGISIYTSQALAVNNGLGFVGKLPNGKYGTIMLPNGILQALESAGYNFSSNKTIAMEQAAYDLAYILSHFNV SNTTIQKVMSYPHQAVVVIDPYTVEFNLDYPYSAFLAALSTSTGAIVNPVFVDENGGVQIDTSNTYLSTHALGSGPYILE TPIGGSYVVLNASPNYWASKVPTKDLNPMLETPKIKTIIIDYQTNEAVRILDLQQEKAQISQIDVIDLQELIGSSGVQQL QNLVNGKTFPTAYTSGNVTIYIWGPSAQIDFLAIDAYQYPFNITAVRLAISHAINPVQIQQQVYKGFAINYVGPLDPSLP YYNSSIIGYTYNPSLSIQLLEEAGFKLTLPNGTTVNPNGKPFPTITLTYQTGSTALQDEALLVQQQLAQIGITVQLNPES AVTIVESYLNPPNSSAYPAFQLAGNFPPVLSPIDPAIYLLSQARLHHGNPAFVDNSTINQLIVEAVRTNNPQELQHIYNE ITLLTLAQAQYVWLDDFLAYTVASSSIHGFWYSPGLDGLFYADLY >Mature_685_residues MKSRKVFKGLSRTFIAIIVVVIVVIGIAVGVLLGNHPSSNNISTTTTSSNIISTTTLSSTSSSTSTPNSVSIPSSITVEE AATPVSVDPASSYDIAGGEIIQNVYQTLVFYNGTNTSSFIGVLAENWTVENNGTTYIFHLWPFITFSNGNPLNATDVWFS IYRTMLINLGISIYTSQALAVNNGLGFVGKLPNGKYGTIMLPNGILQALESAGYNFSSNKTIAMEQAAYDLAYILSHFNV SNTTIQKVMSYPHQAVVVIDPYTVEFNLDYPYSAFLAALSTSTGAIVNPVFVDENGGVQIDTSNTYLSTHALGSGPYILE TPIGGSYVVLNASPNYWASKVPTKDLNPMLETPKIKTIIIDYQTNEAVRILDLQQEKAQISQIDVIDLQELIGSSGVQQL QNLVNGKTFPTAYTSGNVTIYIWGPSAQIDFLAIDAYQYPFNITAVRLAISHAINPVQIQQQVYKGFAINYVGPLDPSLP YYNSSIIGYTYNPSLSIQLLEEAGFKLTLPNGTTVNPNGKPFPTITLTYQTGSTALQDEALLVQQQLAQIGITVQLNPES AVTIVESYLNPPNSSAYPAFQLAGNFPPVLSPIDPAIYLLSQARLHHGNPAFVDNSTINQLIVEAVRTNNPQELQHIYNE ITLLTLAQAQYVWLDDFLAYTVASSSIHGFWYSPGLDGLFYADLY
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=436, Percent_Identity=24.5412844036697, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1787762, Length=426, Percent_Identity=21.830985915493, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789966, Length=309, Percent_Identity=20.7119741100324, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1789887, Length=354, Percent_Identity=25.9887005649718, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 74414; Mature: 74414
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRKVFKGLSRTFIAIIVVVIVVIGIAVGVLLGNHPSSNNISTTTTSSNIISTTTLSST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC SSSTSTPNSVSIPSSITVEEAATPVSVDPASSYDIAGGEIIQNVYQTLVFYNGTNTSSFI CCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEE GVLAENWTVENNGTTYIFHLWPFITFSNGNPLNATDVWFSIYRTMLINLGISIYTSQALA EEEECCEEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCEEE VNNGLGFVGKLPNGKYGTIMLPNGILQALESAGYNFSSNKTIAMEQAAYDLAYILSHFNV EECCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCC SNTTIQKVMSYPHQAVVVIDPYTVEFNLDYPYSAFLAALSTSTGAIVNPVFVDENGGVQI CHHHHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEE DTSNTYLSTHALGSGPYILETPIGGSYVVLNASPNYWASKVPTKDLNPMLETPKIKTIII ECCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE DYQTNEAVRILDLQQEKAQISQIDVIDLQELIGSSGVQQLQNLVNGKTFPTAYTSGNVTI EECCCCEEEEEECCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCEEE YIWGPSAQIDFLAIDAYQYPFNITAVRLAISHAINPVQIQQQVYKGFAINYVGPLDPSLP EEECCCCCEEEEEEEEEECCCCHHHEEEEHHHCCCHHHHHHHHHCCEEEEEECCCCCCCC YYNSSIIGYTYNPSLSIQLLEEAGFKLTLPNGTTVNPNGKPFPTITLTYQTGSTALQDEA CCCCEEEEEEECCCEEEEEEECCCCEEECCCCCEECCCCCCCCEEEEEEECCCCCHHHHH LLVQQQLAQIGITVQLNPESAVTIVESYLNPPNSSAYPAFQLAGNFPPVLSPIDPAIYLL HHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHH SQARLHHGNPAFVDNSTINQLIVEAVRTNNPQELQHIYNEITLLTLAQAQYVWLDDFLAY HHHHHCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEHHHHHHH TVASSSIHGFWYSPGLDGLFYADLY HHHCCCCCEEEECCCCCCEEEEECC >Mature Secondary Structure MKSRKVFKGLSRTFIAIIVVVIVVIGIAVGVLLGNHPSSNNISTTTTSSNIISTTTLSST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC SSSTSTPNSVSIPSSITVEEAATPVSVDPASSYDIAGGEIIQNVYQTLVFYNGTNTSSFI CCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEE GVLAENWTVENNGTTYIFHLWPFITFSNGNPLNATDVWFSIYRTMLINLGISIYTSQALA EEEECCEEEECCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCEEE VNNGLGFVGKLPNGKYGTIMLPNGILQALESAGYNFSSNKTIAMEQAAYDLAYILSHFNV EECCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCC SNTTIQKVMSYPHQAVVVIDPYTVEFNLDYPYSAFLAALSTSTGAIVNPVFVDENGGVQI CHHHHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEE DTSNTYLSTHALGSGPYILETPIGGSYVVLNASPNYWASKVPTKDLNPMLETPKIKTIII ECCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE DYQTNEAVRILDLQQEKAQISQIDVIDLQELIGSSGVQQLQNLVNGKTFPTAYTSGNVTI EECCCCEEEEEECCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCEEE YIWGPSAQIDFLAIDAYQYPFNITAVRLAISHAINPVQIQQQVYKGFAINYVGPLDPSLP EEECCCCCEEEEEEEEEECCCCHHHEEEEHHHCCCHHHHHHHHHCCEEEEEECCCCCCCC YYNSSIIGYTYNPSLSIQLLEEAGFKLTLPNGTTVNPNGKPFPTITLTYQTGSTALQDEA CCCCEEEEEEECCCEEEEEEECCCCEEECCCCCEECCCCCCCCEEEEEEECCCCCHHHHH LLVQQQLAQIGITVQLNPESAVTIVESYLNPPNSSAYPAFQLAGNFPPVLSPIDPAIYLL HHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHH SQARLHHGNPAFVDNSTINQLIVEAVRTNNPQELQHIYNEITLLTLAQAQYVWLDDFLAY HHHHHCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEHHHHHHH TVASSSIHGFWYSPGLDGLFYADLY HHHCCCCCEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA