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The map label for this gene is fadF [H]

Identifier: 227828487

GI number: 227828487

Start: 2043250

End: 2044149

Strand: Direct

Name: fadF [H]

Synonym: M1425_2236

Alternate gene names: 227828487

Gene position: 2043250-2044149 (Clockwise)

Preceding gene: 227828485

Following gene: 227828488

Centisome position: 78.32

GC content: 35.78

Gene sequence:

>900_bases
ATGATAGATGAAGATCAAATCAATTTCATTAGAAGGAACCTATTGAAGTATTTAATGGAGGATTACCTTCCATTTCCGGT
AAATAAGAGTGTTTGTTACGAATGGGCTAATGGTTTAAATCTTAAGAAAGGTGGGGAGACAATAATCTACACCGGTTGTT
CTTATCAATTGGCTGAATTAGGAAAGAGATTTGACGAAATTTTGCCTACATTATCCAAATTTAAGGGTATAGAAAGACTT
TCATCGATCTTAAAGGTCTTCTATAAGCCTAGGGATTCACGCTCATATAAGATACTGAGGAATATTACTTCAGTTCTAAA
ATCTAGTGTAGATTTCGGTTATTTATATGAGGATGAGCCATATAGTGGTACAATCTTACTGGAAATGGGAATGATTGAGG
AATTTAGGGAATACGCTAAGAAATTGATCGAGCTTTTCAACTCTCATGGCGTTAAGAGGATAGTTACGGTAGATCCTCAT
ACTCATTATACGCTCTTTAGAATAAAGGAGATGTTTTCTTCATTATGGAATGTGGAGATTGTAAACTATTTTGAAGTTAT
TAAAAACATTAAGATTAAGGGTGAAGGAACTTTCGTATTTCACGACTCTTGTCTTTATTCAAGGTTTCTGGGGATGAGGG
ATTCCATTAGGGAAGTTATTAAGAGTTCTGGAATAGTGTTGAAGGAGGATGAGATGATAACTGGTAAGGAAACTTCAATG
TGTTGTGGAGGTCCATTGGCTCCAATAAATAAGGAAGCTAGCGATAAAATAGCGAGAAATAGAGCTGAGGCACTAAAGAG
TGTTCACAATAAAGTTCTCTTAGCTTGTCCATTTTGTTACGCTAATCTTTCTCCTTATGTAGAAGCTTACGATTTCGCTG
AGGTGATAAGTGGTGAGTGA

Upstream 100 bases:

>100_bases
TTGCAAGTGGCCCAGTAATGAAATTTTTAACAATCATTATATATAATCTTACACACGTTAGGATAAAAACTTATTATATG
AGGAGTTGATAATTCCATTA

Downstream 100 bases:

>100_bases
TTGGGATATTGCAATAAAGAGGGGAGTAGAGCATAACGTTCCTAGGGTATTTAAGGTATTAAGGGAACATCCATATTTAG
AAGATTTAGCAAGGAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIDEDQINFIRRNLLKYLMEDYLPFPVNKSVCYEWANGLNLKKGGETIIYTGCSYQLAELGKRFDEILPTLSKFKGIERL
SSILKVFYKPRDSRSYKILRNITSVLKSSVDFGYLYEDEPYSGTILLEMGMIEEFREYAKKLIELFNSHGVKRIVTVDPH
THYTLFRIKEMFSSLWNVEIVNYFEVIKNIKIKGEGTFVFHDSCLYSRFLGMRDSIREVIKSSGIVLKEDEMITGKETSM
CCGGPLAPINKEASDKIARNRAEALKSVHNKVLLACPFCYANLSPYVEAYDFAEVISGE

Sequences:

>Translated_299_residues
MIDEDQINFIRRNLLKYLMEDYLPFPVNKSVCYEWANGLNLKKGGETIIYTGCSYQLAELGKRFDEILPTLSKFKGIERL
SSILKVFYKPRDSRSYKILRNITSVLKSSVDFGYLYEDEPYSGTILLEMGMIEEFREYAKKLIELFNSHGVKRIVTVDPH
THYTLFRIKEMFSSLWNVEIVNYFEVIKNIKIKGEGTFVFHDSCLYSRFLGMRDSIREVIKSSGIVLKEDEMITGKETSM
CCGGPLAPINKEASDKIARNRAEALKSVHNKVLLACPFCYANLSPYVEAYDFAEVISGE
>Mature_299_residues
MIDEDQINFIRRNLLKYLMEDYLPFPVNKSVCYEWANGLNLKKGGETIIYTGCSYQLAELGKRFDEILPTLSKFKGIERL
SSILKVFYKPRDSRSYKILRNITSVLKSSVDFGYLYEDEPYSGTILLEMGMIEEFREYAKKLIELFNSHGVKRIVTVDPH
THYTLFRIKEMFSSLWNVEIVNYFEVIKNIKIKGEGTFVFHDSCLYSRFLGMRDSIREVIKSSGIVLKEDEMITGKETSM
CCGGPLAPINKEASDKIARNRAEALKSVHNKVLLACPFCYANLSPYVEAYDFAEVISGE

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 34421; Mature: 34421

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDEDQINFIRRNLLKYLMEDYLPFPVNKSVCYEWANGLNLKKGGETIIYTGCSYQLAEL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
GKRFDEILPTLSKFKGIERLSSILKVFYKPRDSRSYKILRNITSVLKSSVDFGYLYEDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCC
YSGTILLEMGMIEEFREYAKKLIELFNSHGVKRIVTVDPHTHYTLFRIKEMFSSLWNVEI
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHH
VNYFEVIKNIKIKGEGTFVFHDSCLYSRFLGMRDSIREVIKSSGIVLKEDEMITGKETSM
HHHHHHHHCCEEECCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCEEECCCEECCCCCCC
CCGGPLAPINKEASDKIARNRAEALKSVHNKVLLACPFCYANLSPYVEAYDFAEVISGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDEDQINFIRRNLLKYLMEDYLPFPVNKSVCYEWANGLNLKKGGETIIYTGCSYQLAEL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
GKRFDEILPTLSKFKGIERLSSILKVFYKPRDSRSYKILRNITSVLKSSVDFGYLYEDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCC
YSGTILLEMGMIEEFREYAKKLIELFNSHGVKRIVTVDPHTHYTLFRIKEMFSSLWNVEI
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHH
VNYFEVIKNIKIKGEGTFVFHDSCLYSRFLGMRDSIREVIKSSGIVLKEDEMITGKETSM
HHHHHHHHCCEEECCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCEEECCCEECCCCCCC
CCGGPLAPINKEASDKIARNRAEALKSVHNKVLLACPFCYANLSPYVEAYDFAEVISGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]