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The map label for this gene is rpl7ae

Identifier: 227828291

GI number: 227828291

Start: 1864976

End: 1865359

Strand: Direct

Name: rpl7ae

Synonym: M1425_2032

Alternate gene names: 227828291

Gene position: 1864976-1865359 (Clockwise)

Preceding gene: 227828290

Following gene: 227828292

Centisome position: 71.49

GC content: 37.24

Gene sequence:

>384_bases
ATGTCAAAAGCTAGTTATGTTAAGTTTGAAGTACCGCAAGATCTAGCAGATAAGGTATTGGAGGCAGTAAGAAAAGCTAA
GGAAAGTGGAAAAATAAAGAAAGGTACAAATGAGACAACAAAAGCAGTAGAAAGGGGACAAGCTAAATTAGTAGTTATTG
CTGAAGATGTACAACCAGAGGAAATAGTTGCACACTTACCATTGCTATGCGATGAGAAAAAGATACCTTATGTATACGTT
TCCTCTAAAAAAGCTTTAGGTGAAGCTTGTGGGTTGCAAGTGGCTACAGCATCTGCTGCTATCTTAGAGCCTGGCGAGGC
TAAGGATTTAGTTGACGAAATAGTTAAGAGAGTAAACGAAATTAAAGGTAAAACTTCAAGTTAA

Upstream 100 bases:

>100_bases
ACCTAAAAGGGCTAAGCTTTTGCCTTATTCTATAGTAAACTTTATTTTTTGCTAATACTTTTAAAGAGTTGCGTGACGAA
ACTAGAGGAGGATGAACGCG

Downstream 100 bases:

>100_bases
ATCCAACAATATTTTTTACCAGTAAACTTATTTTGTTTTTAGTCCTATCTAATAATTAGTTATGGGCCCGTAGCTTAGCC
AGGTAGAGTGCTGGGCTCCA

Product: 50S ribosomal protein L7Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYV
SSKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNEIKGKTSS

Sequences:

>Translated_127_residues
MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYV
SSKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNEIKGKTSS
>Mature_126_residues
SKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVS
SKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNEIKGKTSS

Specific function: Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family

Homologues:

Organism=Homo sapiens, GI4826860, Length=78, Percent_Identity=47.4358974358974, Blast_Score=89, Evalue=1e-18,
Organism=Homo sapiens, GI51317376, Length=78, Percent_Identity=47.4358974358974, Blast_Score=89, Evalue=1e-18,
Organism=Homo sapiens, GI8923444, Length=107, Percent_Identity=31.7757009345794, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17535189, Length=103, Percent_Identity=42.7184466019417, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17555988, Length=108, Percent_Identity=30.5555555555556, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32565833, Length=100, Percent_Identity=35, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI32565827, Length=95, Percent_Identity=35.7894736842105, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6320809, Length=87, Percent_Identity=43.6781609195402, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319993, Length=116, Percent_Identity=35.3448275862069, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17864298, Length=78, Percent_Identity=48.7179487179487, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21356151, Length=101, Percent_Identity=35.6435643564356, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL7A_SULIA (C3N038)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002844023.1
- GeneID:   7811929
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_2112
- OMA:   GTNEATK
- ProtClustDB:   PRK04175
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00326
- InterPro:   IPR004038
- InterPro:   IPR018492
- InterPro:   IPR022481
- InterPro:   IPR004037
- InterPro:   IPR000948
- PRINTS:   PR00881
- PRINTS:   PR00884
- TIGRFAMs:   TIGR03677

Pfam domain/function: PF01248 Ribosomal_L7Ae

EC number: NA

Molecular weight: Translated: 13708; Mature: 13577

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPE
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHH
EIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNE
HHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHH
IKGKTSS
HCCCCCC
>Mature Secondary Structure 
SKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPE
CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHH
EIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNE
HHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHH
IKGKTSS
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA