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The map label for this gene is yidA [C]

Identifier: 227828289

GI number: 227828289

Start: 1862184

End: 1862870

Strand: Direct

Name: yidA [C]

Synonym: M1425_2030

Alternate gene names: 227828289

Gene position: 1862184-1862870 (Clockwise)

Preceding gene: 227828288

Following gene: 227828290

Centisome position: 71.38

GC content: 33.33

Gene sequence:

>687_bases
ATGATAAAATTAGTTTTAATGGATTTAGATGGAACGTTAACCGAAGATAGGGATTCTACGAGAATTGACCTAGATGCAAT
TTACGCAATAAGGCTCTTGCAGGAAAAAAGGATTAAAGTAGGTTTAGTTAGCGGAAATTCTTACCCAATCCTTAGAGGGC
TTTACACATATCTTTATTTAGATGGTGGAATTGTCGCAGAAAACGGATGTATAGTATTTTACAAGGAAAAATATAGGTTA
TGTAAACAAATGGATAAGAGTCTAGTAATTGAATTTAAATCTCTATTTAAGTTAAGGGATACATGGCAAAATGAGTATAG
AGAATGTGATTTTGGTTTCGTCCCCGCAAAATTAACTGATGAAATGATAAATTGGGCTAAAGAAAAGAATCTGTATATTA
AAAGTAGTGGATATGCTGTTCATATTGCATATAATGCAGCAGGGAAAAGTGTAGGAGTGGAAAAGTTGCTTCAATTACAA
GGTTTAAAGAAAGAAGATGTAGCAGCTATCGGTGATTCGTCAACTGATATAGAATTGTTTCAACAAGTAGGATTTAAAGT
AGCAGTAGGAAATGCGGATGATGAACTGAAAGATATAGCTGATTATATAACAAGTAATAAAAGCGGAAAAGGTGTAAGGG
AATTTGTGGATAAATTACTAAAAGGGGAGCTTGATGTCATCAAGTGA

Upstream 100 bases:

>100_bases
AGTATAAATCCACGTTAATTAATCATATACCAGAGACTTTAACTATTAGAAGAATTTATGTAGATCATGAATACGCCAAG
AGAGCTAGAGATGTCGTTCC

Downstream 100 bases:

>100_bases
ACTACGGGAAATTATATATAAATACGCTCTTCAAAACGCGGTAAAGCATGATGGTAAAGCTGAAGCGGGCCCGGTGATGA
GTAAGATCATAGCAGAGAGG

Product: SPP-like hydrolase

Products: NA

Alternate protein names: PGP 1; PGPase 1 [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIKLVLMDLDGTLTEDRDSTRIDLDAIYAIRLLQEKRIKVGLVSGNSYPILRGLYTYLYLDGGIVAENGCIVFYKEKYRL
CKQMDKSLVIEFKSLFKLRDTWQNEYRECDFGFVPAKLTDEMINWAKEKNLYIKSSGYAVHIAYNAAGKSVGVEKLLQLQ
GLKKEDVAAIGDSSTDIELFQQVGFKVAVGNADDELKDIADYITSNKSGKGVREFVDKLLKGELDVIK

Sequences:

>Translated_228_residues
MIKLVLMDLDGTLTEDRDSTRIDLDAIYAIRLLQEKRIKVGLVSGNSYPILRGLYTYLYLDGGIVAENGCIVFYKEKYRL
CKQMDKSLVIEFKSLFKLRDTWQNEYRECDFGFVPAKLTDEMINWAKEKNLYIKSSGYAVHIAYNAAGKSVGVEKLLQLQ
GLKKEDVAAIGDSSTDIELFQQVGFKVAVGNADDELKDIADYITSNKSGKGVREFVDKLLKGELDVIK
>Mature_228_residues
MIKLVLMDLDGTLTEDRDSTRIDLDAIYAIRLLQEKRIKVGLVSGNSYPILRGLYTYLYLDGGIVAENGCIVFYKEKYRL
CKQMDKSLVIEFKSLFKLRDTWQNEYRECDFGFVPAKLTDEMINWAKEKNLYIKSSGYAVHIAYNAAGKSVGVEKLLQLQ
GLKKEDVAAIGDSSTDIELFQQVGFKVAVGNADDELKDIADYITSNKSGKGVREFVDKLLKGELDVIK

Specific function: Catalyzes the dephosphorylation of 2-phosphoglycolate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal SPP-like hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR006382
- InterPro:   IPR006378 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25762; Mature: 25762

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLVLMDLDGTLTEDRDSTRIDLDAIYAIRLLQEKRIKVGLVSGNSYPILRGLYTYLYL
CEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHEE
DGGIVAENGCIVFYKEKYRLCKQMDKSLVIEFKSLFKLRDTWQNEYRECDFGFVPAKLTD
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EMINWAKEKNLYIKSSGYAVHIAYNAAGKSVGVEKLLQLQGLKKEDVAAIGDSSTDIELF
HHHHHHHHCCEEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHCCCCCCCHHHHH
QQVGFKVAVGNADDELKDIADYITSNKSGKGVREFVDKLLKGELDVIK
HHCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKLVLMDLDGTLTEDRDSTRIDLDAIYAIRLLQEKRIKVGLVSGNSYPILRGLYTYLYL
CEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHEE
DGGIVAENGCIVFYKEKYRLCKQMDKSLVIEFKSLFKLRDTWQNEYRECDFGFVPAKLTD
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EMINWAKEKNLYIKSSGYAVHIAYNAAGKSVGVEKLLQLQGLKKEDVAAIGDSSTDIELF
HHHHHHHHCCEEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHCCCCCCCHHHHH
QQVGFKVAVGNADDELKDIADYITSNKSGKGVREFVDKLLKGELDVIK
HHCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]