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The map label for this gene is yhbZ [C]

Identifier: 227827776

GI number: 227827776

Start: 1410858

End: 1411856

Strand: Direct

Name: yhbZ [C]

Synonym: M1425_1508

Alternate gene names: 227827776

Gene position: 1410858-1411856 (Clockwise)

Preceding gene: 227827775

Following gene: 227827777

Centisome position: 54.08

GC content: 32.53

Gene sequence:

>999_bases
ATGTTAAATCCATTTGAAAAGTTACAGATCCCACCAAAGGCTAATTACACTATCGATACTATGCTAAAAAGGCTGCCAAA
GATAGGTGGTACCACAGTTAGAGATAGGGAGATAAGAAGGTTAAAAGAATATTATGAAAGAATTAAGAAATACCATGACT
TTGTAGTGCAATTCCCTAGAATTGATGAATTACATCCTTTTTATTTAGAGGCAACTAGAATTGTAACTGACATTGATAAA
CTGAGAATTTGTTTATCAGTCACTAAGAAAGCAAGTGCAATATCTATGAAGATATTGAAAGAATACATCAACCAGATAAG
GAAAAGCCCTGAAAATGAAGCTAATCGAATAATGCGGCAAGCTTTTGGAAGAGTAAGTTCCATACTAAGAAAATCTAGTG
AATGCATAGATAAAGTAATAGATGTAGCCAAAGAGTTAAAGAAAATTCAAGGTATAGATCCTATATTGCCAACTATTGTA
GTTGCAGGTCCTCCAAATGTAGGCAAGTCTACTTTGGTTTCAAAAATCTCCACAGCTAAACCAGAAATTGCAAGTTATCC
CTTTACTACAAAAGAAGTTCACGTGGGCCACGTTATTTTAGATGATTTTCGTATCCAGATTATAGATACGCCAGGCATTT
TAGATAGGCCAGAAATTGAGAGAAATAATATAGAGAGAAAGGCTACTAATGCGATAAGAAATTTAAACGGTATAATCATA
TTCATGTTTGACTCCTCGATCTCCTCAGTTCTTTCTGTTGAAAGTCAAATAGAATTATTTAGAGAAGTAAAATTATTAAA
AAAGGTTATAATCCCTGTTATCAATAAAATTGATGAGAAAGACGATGAATATTATAAGAAGATTGTAGATTTTCTTTCTA
AAGAAGGAAGTAAATGGTATGAAATAAGTGCTGAAAAGGGAATAGGTTTAGACAAGTTAAAAGAAGAGCTTTTTAGCTTG
ATAAAGAGTAGTGGTACAAATGAAGTATCGCGTAATTGA

Upstream 100 bases:

>100_bases
AAGGTATGTTATTAGCTGCCGGATGTAAGGAGGACGAAGCGAAAGGAATAAAACCTAGGATAATAACTGTAGATGGAGAA
GTCCCTCCAGGAACTAAGAT

Downstream 100 bases:

>100_bases
AATCTTTACCTCTGTTCAAGGTGAAGGTGAGGTCATCGGGACTCCTTCAAATTTCATTAGACTCGCCACGTGCAATTTAA
GATGTGTATGGTGTGATACA

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLNPFEKLQIPPKANYTIDTMLKRLPKIGGTTVRDREIRRLKEYYERIKKYHDFVVQFPRIDELHPFYLEATRIVTDIDK
LRICLSVTKKASAISMKILKEYINQIRKSPENEANRIMRQAFGRVSSILRKSSECIDKVIDVAKELKKIQGIDPILPTIV
VAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQIIDTPGILDRPEIERNNIERKATNAIRNLNGIII
FMFDSSISSVLSVESQIELFREVKLLKKVIIPVINKIDEKDDEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSL
IKSSGTNEVSRN

Sequences:

>Translated_332_residues
MLNPFEKLQIPPKANYTIDTMLKRLPKIGGTTVRDREIRRLKEYYERIKKYHDFVVQFPRIDELHPFYLEATRIVTDIDK
LRICLSVTKKASAISMKILKEYINQIRKSPENEANRIMRQAFGRVSSILRKSSECIDKVIDVAKELKKIQGIDPILPTIV
VAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQIIDTPGILDRPEIERNNIERKATNAIRNLNGIII
FMFDSSISSVLSVESQIELFREVKLLKKVIIPVINKIDEKDDEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSL
IKSSGTNEVSRN
>Mature_332_residues
MLNPFEKLQIPPKANYTIDTMLKRLPKIGGTTVRDREIRRLKEYYERIKKYHDFVVQFPRIDELHPFYLEATRIVTDIDK
LRICLSVTKKASAISMKILKEYINQIRKSPENEANRIMRQAFGRVSSILRKSSECIDKVIDVAKELKKIQGIDPILPTIV
VAGPPNVGKSTLVSKISTAKPEIASYPFTTKEVHVGHVILDDFRIQIIDTPGILDRPEIERNNIERKATNAIRNLNGIII
FMFDSSISSVLSVESQIELFREVKLLKKVIIPVINKIDEKDDEYYKKIVDFLSKEGSKWYEISAEKGIGLDKLKEELFSL
IKSSGTNEVSRN

Specific function: Unknown

COG id: COG1084

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP1/OBG family. NOG subfamily [H]

Homologues:

Organism=Homo sapiens, GI55953087, Length=332, Percent_Identity=30.1204819277108, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25145602, Length=336, Percent_Identity=31.8452380952381, Blast_Score=156, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI25145600, Length=336, Percent_Identity=31.8452380952381, Blast_Score=156, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17508313, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325164, Length=278, Percent_Identity=30.2158273381295, Blast_Score=148, Evalue=1e-36,
Organism=Drosophila melanogaster, GI19921908, Length=287, Percent_Identity=33.7979094076655, Blast_Score=164, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006073
- InterPro:   IPR010674
- InterPro:   IPR005225 [H]

Pfam domain/function: PF06858 NOG1 [H]

EC number: NA

Molecular weight: Translated: 38090; Mature: 38090

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPFEKLQIPPKANYTIDTMLKRLPKIGGTTVRDREIRRLKEYYERIKKYHDFVVQFPR
CCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDELHPFYLEATRIVTDIDKLRICLSVTKKASAISMKILKEYINQIRKSPENEANRIMRQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFGRVSSILRKSSECIDKVIDVAKELKKIQGIDPILPTIVVAGPPNVGKSTLVSKISTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCC
PEIASYPFTTKEVHVGHVILDDFRIQIIDTPGILDRPEIERNNIERKATNAIRNLNGIII
CCHHCCCCCCCCEEECEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
FMFDSSISSVLSVESQIELFREVKLLKKVIIPVINKIDEKDDEYYKKIVDFLSKEGSKWY
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
EISAEKGIGLDKLKEELFSLIKSSGTNEVSRN
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNPFEKLQIPPKANYTIDTMLKRLPKIGGTTVRDREIRRLKEYYERIKKYHDFVVQFPR
CCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDELHPFYLEATRIVTDIDKLRICLSVTKKASAISMKILKEYINQIRKSPENEANRIMRQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFGRVSSILRKSSECIDKVIDVAKELKKIQGIDPILPTIVVAGPPNVGKSTLVSKISTAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCC
PEIASYPFTTKEVHVGHVILDDFRIQIIDTPGILDRPEIERNNIERKATNAIRNLNGIII
CCHHCCCCCCCCEEECEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
FMFDSSISSVLSVESQIELFREVKLLKKVIIPVINKIDEKDDEYYKKIVDFLSKEGSKWY
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
EISAEKGIGLDKLKEELFSLIKSSGTNEVSRN
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]