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The map label for this gene is 227827759

Identifier: 227827759

GI number: 227827759

Start: 1392641

End: 1393273

Strand: Direct

Name: 227827759

Synonym: M1425_1491

Alternate gene names: NA

Gene position: 1392641-1393273 (Clockwise)

Preceding gene: 227827757

Following gene: 227827775

Centisome position: 53.38

GC content: 33.49

Gene sequence:

>633_bases
ATGGATAGAGTTAAAAGTGAGAATATGATTGAAGTTATTATGCTTGTTCAGAAAATTAAAGGTTATCTTGATTCAATTAG
TCACACGCTTCAAGAAAGATTTGAGAATAGAGAAAGAGTATTGCTATTGGCTAGAGAATTAATAAGATATTGTGGCGATA
CAATCTCACTATCTCATAAGGGTAAAAAGGAAGAGGCATTAAGAAAGTATCAAGTTGCAATCTCTAAGGCATCTGAAATT
CAAAAGATTATAGATAACTTTCCTGAACTATTATATGGTGACATAGGTACTGCATATCAAGAACTTGCTGAGGCTTCCAT
AGTGATCTCCTTGTATTTTGATGTAGACTTAAAACTTTCTAAAGAACTCGGTATTCCAGACATATATTATATAAGTGGAA
TAGCAGATGCGATAGGTGAGATGAGAAGAAGAGTATTAGAATTGCTCAAGAAAAATGAAATAGGTGAAGCTGAAAAAACA
TATGAGATGATGGAAGAGATATACGAATTACTATGGAGTTTCGAGTATCCTAAATCCCTAGTCCCTGGACTAAGACAAAA
GATTGATGTTATAAGAAGACTATTAGAGGAGACTAATCACGATATTTTTCTCGCTAAACTCGGTAGGTCCTAA

Upstream 100 bases:

>100_bases
GTCCAACCTACGCCTATTATACCTGCTCCTACTACGGCCACCTTATTAATGGATTTCATATGTATAAACATGTTTAAGAA
GTATAAGTAAGTTTCTCCTA

Downstream 100 bases:

>100_bases
TAACATGATCTACTAACTTTTCGGCAACATTGATACCAGTTGCTAACATAAATCCTTTGAATTCTGGAACGTCATTTAGC
TCGTTTATAACATATCCCTT

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDRVKSENMIEVIMLVQKIKGYLDSISHTLQERFENRERVLLLARELIRYCGDTISLSHKGKKEEALRKYQVAISKASEI
QKIIDNFPELLYGDIGTAYQELAEASIVISLYFDVDLKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNEIGEAEKT
YEMMEEIYELLWSFEYPKSLVPGLRQKIDVIRRLLEETNHDIFLAKLGRS

Sequences:

>Translated_210_residues
MDRVKSENMIEVIMLVQKIKGYLDSISHTLQERFENRERVLLLARELIRYCGDTISLSHKGKKEEALRKYQVAISKASEI
QKIIDNFPELLYGDIGTAYQELAEASIVISLYFDVDLKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNEIGEAEKT
YEMMEEIYELLWSFEYPKSLVPGLRQKIDVIRRLLEETNHDIFLAKLGRS
>Mature_210_residues
MDRVKSENMIEVIMLVQKIKGYLDSISHTLQERFENRERVLLLARELIRYCGDTISLSHKGKKEEALRKYQVAISKASEI
QKIIDNFPELLYGDIGTAYQELAEASIVISLYFDVDLKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNEIGEAEKT
YEMMEEIYELLWSFEYPKSLVPGLRQKIDVIRRLLEETNHDIFLAKLGRS

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 24408; Mature: 24408

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVKSENMIEVIMLVQKIKGYLDSISHTLQERFENRERVLLLARELIRYCGDTISLSHK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GKKEEALRKYQVAISKASEIQKIIDNFPELLYGDIGTAYQELAEASIVISLYFDVDLKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
KELGIPDIYYISGIADAIGEMRRRVLELLKKNEIGEAEKTYEMMEEIYELLWSFEYPKSL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
VPGLRQKIDVIRRLLEETNHDIFLAKLGRS
HHHHHHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MDRVKSENMIEVIMLVQKIKGYLDSISHTLQERFENRERVLLLARELIRYCGDTISLSHK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GKKEEALRKYQVAISKASEIQKIIDNFPELLYGDIGTAYQELAEASIVISLYFDVDLKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHH
KELGIPDIYYISGIADAIGEMRRRVLELLKKNEIGEAEKTYEMMEEIYELLWSFEYPKSL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
VPGLRQKIDVIRRLLEETNHDIFLAKLGRS
HHHHHHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]