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The map label for this gene is rpl15p [H]

Identifier: 227827713

GI number: 227827713

Start: 1351065

End: 1351499

Strand: Direct

Name: rpl15p [H]

Synonym: M1425_1442

Alternate gene names: 227827713

Gene position: 1351065-1351499 (Clockwise)

Preceding gene: 227827712

Following gene: 227827714

Centisome position: 51.79

GC content: 38.16

Gene sequence:

>435_bases
ATGGTAGTAAGAAGAGAGAAAAAGAGTAGAAAAATGAGAGGATCGCGAACCATGGGATGGGGTATTAGGGGTCAACATAG
GGATAGAGGATCACAGGGTGGTAGACAAATTGGCATGCATAAGGAGAAATGGTCATGGTTAGTTAAATACGGTGAAGGAT
GGTATGGGAAGCATGGATTCAGAAACCCCACTACAAAATTGACAAGTGCTATTTCGTTGAGAAAACTTAATGAGTTATTA
GTGAGTGGTTCTATAAAAATTAAAGAAATAGATGGAAAAAAGATAGTAGACTTAAATGAGTTAGGGTATGATAAATTACT
CGGTGGTGGTATCATAAGTGTTCCCGTTACTATAAAAGTAGGTAAGGCTACCGATAGAGCGATACAGAAAGTGAAGCAGA
TAGGAGGAGAAGTAATATTAAGCCCAACTGAGTAA

Upstream 100 bases:

>100_bases
GGTGGGTTTAAGGGTAGTGTTAAAAGGCCCTATAAAAATAAAGGTGAGTTCGGATATAGAGGAGATAAGATAAATGAATT
AATGAGGAGGATGATGTAAA

Downstream 100 bases:

>100_bases
TTTTTTTGAGTAAATTATGTCATTCATCGATTCACTCGCCACTCTTGGGCAATACTTGCCAGCGGTTACTAAACCTAAAG
AGAAACCTTCGCTAGGTCAA

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGEGWYGKHGFRNPTTKLTSAISLRKLNELL
VSGSIKIKEIDGKKIVDLNELGYDKLLGGGIISVPVTIKVGKATDRAIQKVKQIGGEVILSPTE

Sequences:

>Translated_144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGEGWYGKHGFRNPTTKLTSAISLRKLNELL
VSGSIKIKEIDGKKIVDLNELGYDKLLGGGIISVPVTIKVGKATDRAIQKVKQIGGEVILSPTE
>Mature_144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGEGWYGKHGFRNPTTKLTSAISLRKLNELL
VSGSIKIKEIDGKKIVDLNELGYDKLLGGGIISVPVTIKVGKATDRAIQKVKQIGGEVILSPTE

Specific function: Binds to the 23S rRNA [H]

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family [H]

Homologues:

Organism=Drosophila melanogaster, GI17136880, Length=147, Percent_Identity=35.3741496598639, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001196
- InterPro:   IPR021131 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 16097; Mature: 16097

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGEGWYGKHGF
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCC
RNPTTKLTSAISLRKLNELLVSGSIKIKEIDGKKIVDLNELGYDKLLGGGIISVPVTIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHCCHHHHHCCCEEEEEEEEEE
GKATDRAIQKVKQIGGEVILSPTE
CCCHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGEGWYGKHGF
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCC
RNPTTKLTSAISLRKLNELLVSGSIKIKEIDGKKIVDLNELGYDKLLGGGIISVPVTIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHCCHHHHHCCCEEEEEEEEEE
GKATDRAIQKVKQIGGEVILSPTE
CCCHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]