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The map label for this gene is rpl30p

Identifier: 227827712

GI number: 227827712

Start: 1350587

End: 1351063

Strand: Direct

Name: rpl30p

Synonym: M1425_1441

Alternate gene names: 227827712

Gene position: 1350587-1351063 (Clockwise)

Preceding gene: 227827711

Following gene: 227827713

Centisome position: 51.77

GC content: 33.33

Gene sequence:

>477_bases
ATGGTGGAGCTACTAGGCATAATTAGAATTAGAGGTTGGGCAAAGGCTCCTTGGTATATTAATGAGACATTAGAGATGTT
GAGATTAAGGTATAATTTCAATACGATGATGTATCCAAAAACATCTCAAATACTGGGTATGCTAAATAAAGTTTCTCCAT
ATGTCACATGGGGAGAGATAGATCCAGATACTTTAAAGCTACTAATTATAAAGAGACTTGAAACAGCAAAAGGGGATAAG
GTTTCAGATAGTTATGTTAAAGAAGTGTTAAAGATTGAAAATATTGATACAATGGTAAAACAGCTATATGAAGGCAAGAT
TTACCTACATAAACTTGATCAATATTTTAAGTTGCCTATTCGATTACATCCACCCAAAGGTGGGTTTAAGGGTAGTGTTA
AAAGGCCCTATAAAAATAAAGGTGAGTTCGGATATAGAGGAGATAAGATAAATGAATTAATGAGGAGGATGATGTAA

Upstream 100 bases:

>100_bases
TAGAACTACAGAGAATTTTGTCAGAGCTGGATATAGTGCACTTTATAACACTTATAACTTCGTAACTTTACAAGATTGGG
CTAGGAAGAGGTAATCAGAT

Downstream 100 bases:

>100_bases
AATGGTAGTAAGAAGAGAGAAAAAGAGTAGAAAAATGAGAGGATCGCGAACCATGGGATGGGGTATTAGGGGTCAACATA
GGGATAGAGGATCACAGGGT

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVELLGIIRIRGWAKAPWYINETLEMLRLRYNFNTMMYPKTSQILGMLNKVSPYVTWGEIDPDTLKLLIIKRLETAKGDK
VSDSYVKEVLKIENIDTMVKQLYEGKIYLHKLDQYFKLPIRLHPPKGGFKGSVKRPYKNKGEFGYRGDKINELMRRMM

Sequences:

>Translated_158_residues
MVELLGIIRIRGWAKAPWYINETLEMLRLRYNFNTMMYPKTSQILGMLNKVSPYVTWGEIDPDTLKLLIIKRLETAKGDK
VSDSYVKEVLKIENIDTMVKQLYEGKIYLHKLDQYFKLPIRLHPPKGGFKGSVKRPYKNKGEFGYRGDKINELMRRMM
>Mature_158_residues
MVELLGIIRIRGWAKAPWYINETLEMLRLRYNFNTMMYPKTSQILGMLNKVSPYVTWGEIDPDTLKLLIIKRLETAKGDK
VSDSYVKEVLKIENIDTMVKQLYEGKIYLHKLDQYFKLPIRLHPPKGGFKGSVKRPYKNKGEFGYRGDKINELMRRMM

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

Organism=Drosophila melanogaster, GI24583248, Length=166, Percent_Identity=27.710843373494, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_SULIA (C3N5U8)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843418.1
- GeneID:   7814257
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1491
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 18648; Mature: 18648

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELLGIIRIRGWAKAPWYINETLEMLRLRYNFNTMMYPKTSQILGMLNKVSPYVTWGEI
CCHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEECCC
DPDTLKLLIIKRLETAKGDKVSDSYVKEVLKIENIDTMVKQLYEGKIYLHKLDQYFKLPI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHEEEHHHHHCCCE
RLHPPKGGFKGSVKRPYKNKGEFGYRGDKINELMRRMM
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MVELLGIIRIRGWAKAPWYINETLEMLRLRYNFNTMMYPKTSQILGMLNKVSPYVTWGEI
CCHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEECCC
DPDTLKLLIIKRLETAKGDKVSDSYVKEVLKIENIDTMVKQLYEGKIYLHKLDQYFKLPI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHEEEHHHHHCCCE
RLHPPKGGFKGSVKRPYKNKGEFGYRGDKINELMRRMM
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA