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The map label for this gene is rnp1 [H]

Identifier: 227827699

GI number: 227827699

Start: 1344695

End: 1344934

Strand: Direct

Name: rnp1 [H]

Synonym: M1425_1428

Alternate gene names: 227827699

Gene position: 1344695-1344934 (Clockwise)

Preceding gene: 227827698

Following gene: 227827700

Centisome position: 51.54

GC content: 29.58

Gene sequence:

>240_bases
ATGATTTTGGATTATATTAATTCTAAAATAAGGATTTTATGGTACACGGATCCTTCTCTAATTTCTAGAGAAGGTCTAAT
TTTACTAGAGACAGAAAAAACATTTTTGATTAGGTTAAGGGGGAAAAACAAGGTTATAAGGATATTTAAAGCTCATGGTA
TATTTGAGATAACTTTTAAAGGTAAGTCTTTTATAATAGCTGGCTATAGGCTGGTAAGAAAACCTTGGAGAAGAATTTAG

Upstream 100 bases:

>100_bases
ACAAGAAAAGACATAGCAAGAATATTAACAGTTTTAAGTGAAAAGAAGAGAGAAGGTAAAGGAAAAGCAAAAGTGGAGAA
TAAATAATTTTATATGTTTT

Downstream 100 bases:

>100_bases
GTGAGCTAGATGGGATCTAAGGGGAAGATGGTAAAGGACCCGGGAATACCTAATGTTGTTATTCCCGAGAAGGCATGCGA
AGATGAAGATTGCCCTTATC

Product: ribonuclease P, Rpp29

Products: NA

Alternate protein names: RNase P component 1 [H]

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MILDYINSKIRILWYTDPSLISREGLILLETEKTFLIRLRGKNKVIRIFKAHGIFEITFKGKSFIIAGYRLVRKPWRRI

Sequences:

>Translated_79_residues
MILDYINSKIRILWYTDPSLISREGLILLETEKTFLIRLRGKNKVIRIFKAHGIFEITFKGKSFIIAGYRLVRKPWRRI
>Mature_79_residues
MILDYINSKIRILWYTDPSLISREGLILLETEKTFLIRLRGKNKVIRIFKAHGIFEITFKGKSFIIAGYRLVRKPWRRI

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002730 [H]

Pfam domain/function: PF01868 UPF0086 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 9466; Mature: 9466

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDYINSKIRILWYTDPSLISREGLILLETEKTFLIRLRGKNKVIRIFKAHGIFEITFK
CEECCCCCEEEEEEECCCHHCCCCCEEEEECCCEEEEEECCCCEEEEEEECCCEEEEEEC
GKSFIIAGYRLVRKPWRRI
CCEEEEEEEHHHHHHHHCC
>Mature Secondary Structure
MILDYINSKIRILWYTDPSLISREGLILLETEKTFLIRLRGKNKVIRIFKAHGIFEITFK
CEECCCCCEEEEEEECCCHHCCCCCEEEEECCCEEEEEECCCCEEEEEEECCCEEEEEEC
GKSFIIAGYRLVRKPWRRI
CCEEEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]