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The map label for this gene is rpl15e

Identifier: 227827670

GI number: 227827670

Start: 1321944

End: 1322594

Strand: Direct

Name: rpl15e

Synonym: M1425_1399

Alternate gene names: 227827670

Gene position: 1321944-1322594 (Clockwise)

Preceding gene: 227827668

Following gene: 227827671

Centisome position: 50.67

GC content: 37.48

Gene sequence:

>651_bases
ATGACATTATCAGTGTATCACTATATAGAGAACACATGGAATTCAGAAGAGTGGAAAAAAGGTGTATTAAGGCAGAGATT
TATTGAATGGAGAAAAGAGCCTTCGATAGTTAGGTTAGCTAAACCAACTAGGCTAAATAGGGCTAGAAGTTTAGGCTACA
AGGCTAAGCAAGGATTTGTTATAGTGAGAGTCAGAGTTAGGAGAGGAGGTCTTAATAAGCCTAGACCAAATAAGGGAAGA
AGACCAAAAAGGATGGGTGTTTATGGTTATGGTCCAGCTAAAGGATATAAGTGGATAGCTGAGGAAAGGGCTGCAAGGAA
ATACCCCAATTTAGAGGTTCTTGGTAGTTATTATGTTGGAGAGGATGGTCTTTACAAGTATTATGAGATAATCATGGTGG
ATCCTTCTCATCCAGTAATAAAGAATGATCCTAATTATAAGTGGCTTCAAGATCCTAGCAATAGGAATAGAGTGTTTAGA
GGTTTAACATCTGCAGGTAAGAAGGCTAGAGGATTGAGGAAATCTAAAGGGTTTAAAGGTACTGTAAAACATAAGTGGAG
TAGGAAACAGAAAGAGAGAGAAGAGAAGAAGAGACATGAAGCGAGTAAGTATTATAGATTACAAAGGTATGATAAAATAC
CAGGAAAGTGA

Upstream 100 bases:

>100_bases
ACCTACATTGGTCTTTCCTATAATTCCAATGGTAATCATATGTTCTGATTTAGTGGACACATTTATTAATTAGATGCTTA
GCATAGTATTTTGAGAATAG

Downstream 100 bases:

>100_bases
GCATGAAAGTAAATCAAGCAATACTTTCAGTTTTTATTCATGAGACAGAGGATTACAATAAAATAGTAAATACCATAGAG
AGTTTTTTCTCTCCTCTTAT

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTLSVYHYIENTWNSEEWKKGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGR
RPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFR
GLTSAGKKARGLRKSKGFKGTVKHKWSRKQKEREEKKRHEASKYYRLQRYDKIPGK

Sequences:

>Translated_216_residues
MTLSVYHYIENTWNSEEWKKGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGR
RPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFR
GLTSAGKKARGLRKSKGFKGTVKHKWSRKQKEREEKKRHEASKYYRLQRYDKIPGK
>Mature_215_residues
TLSVYHYIENTWNSEEWKKGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGRR
PKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRG
LTSAGKKARGLRKSKGFKGTVKHKWSRKQKEREEKKRHEASKYYRLQRYDKIPGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=184, Percent_Identity=42.3913043478261, Blast_Score=147, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17541432, Length=184, Percent_Identity=41.8478260869565, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6323057, Length=183, Percent_Identity=43.1693989071038, Blast_Score=142, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6323769, Length=160, Percent_Identity=46.875, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_SULIA (C3N5Q6)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843376.1
- GeneID:   7814216
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1449
- OMA:   KWYEVIL
- ProtClustDB:   PRK04243
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 25677; Mature: 25546

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSVYHYIENTWNSEEWKKGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFV
CEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCEE
IVRVRVRRGGLNKPRPNKGRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVG
EEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
EDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKG
CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
TVKHKWSRKQKEREEKKRHEASKYYRLQRYDKIPGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TLSVYHYIENTWNSEEWKKGVLRQRFIEWRKEPSIVRLAKPTRLNRARSLGYKAKQGFV
EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCEE
IVRVRVRRGGLNKPRPNKGRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVG
EEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
EDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKG
CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
TVKHKWSRKQKEREEKKRHEASKYYRLQRYDKIPGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA