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The map label for this gene is rps3Ae

Identifier: 227827667

GI number: 227827667

Start: 1318879

End: 1319505

Strand: Direct

Name: rps3Ae

Synonym: M1425_1396

Alternate gene names: 227827667

Gene position: 1318879-1319505 (Clockwise)

Preceding gene: 227827666

Following gene: 227827668

Centisome position: 50.55

GC content: 35.57

Gene sequence:

>627_bases
ATGTCAGCTAAAGGAGGGACAATCAAGGATAAGTGGAAAATGAAGAAATGGTATAGTATAATTGCACCTAAAGTTTTTGG
AGAGGTTTCCTTAGGTTCTACACCAGCCTACGATGTGACTCAAACCATAGGGAGAAGAGTTGAGACGACTTTATATGATC
TCACTGGTGATTTCAGCCAAGTTTACGTTCACTTATACTTTAAGATTGTAAGTAATGAAGGGGACAGATTGATTACGAGA
TTTGTTGGACATGAGCTCTCGAGAGATTACTTAAGATCATTAATTAGGAGAAAGAGCTCTAAAGTAAACAGCGTATTTGA
TGTTACTACTAAGGATGGCTATGTAGTAAGGGTTAAGGGATTAGTTCTAACTACGTATAAATGTCATCAATCTCAAAAAA
CTGCGATTAGAAAAATAATTAATGAGACCATATCCAAAAAAGCTAGTGAACTTACCTTTGATGATTTTACACAAGAGGTA
GTATTTGGGAGATTAGCTAATGAAATATTTGAGGCAACAAAGAAGATATACCCACTAAGGAAGGCTGAAATAGAAAAAAC
TAAAGTGCTAAAAGTGCCAGAAAATTTAGGTAAACAAGTTGAAAGCAGTAGTGTTAGCAGCGGGTAA

Upstream 100 bases:

>100_bases
ATTATAAAGGGAGTAAAGGATGAGGAAGAGGCTAGGGTCATTGTGCATTTTTTGAGAAAACTTTATACCAGAATAATCCA
CAATGAAAAGGAGATGAATA

Downstream 100 bases:

>100_bases
AGGAGAGAGATTAGAACCAATAACTCATACAAGACCTAAACCTTTTGTTCCTGTTCTTGATACTCCTTTAATTTTAAGAA
ATATTAGAATAGTTAAGAAA

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSAKGGTIKDKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRVETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITR
FVGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEV
VFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG

Sequences:

>Translated_208_residues
MSAKGGTIKDKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRVETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITR
FVGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEV
VFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG
>Mature_207_residues
SAKGGTIKDKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRVETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRF
VGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVV
FGRLANEIFEATKKIYPLRKAEIEKTKVLKVPENLGKQVESSSVSSG

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=214, Percent_Identity=27.1028037383178, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17553700, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323474, Length=203, Percent_Identity=29.5566502463054, Blast_Score=91, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6323577, Length=201, Percent_Identity=28.8557213930348, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17864162, Length=205, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24638499, Length=161, Percent_Identity=27.3291925465839, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_SULIA (C3N5Q3)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843373.1
- GeneID:   7814213
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1446
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 23616; Mature: 23485

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKGGTIKDKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRVETTLYDLTGDFSQ
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVKG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEC
LVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KAEIEKTKVLKVPENLGKQVESSSVSSG
HHHHHHHHHEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAKGGTIKDKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRVETTLYDLTGDFSQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
VYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVKG
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEC
LVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KAEIEKTKVLKVPENLGKQVESSSVSSG
HHHHHHHHHEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA