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The map label for this gene is rpl21e

Identifier: 227827661

GI number: 227827661

Start: 1315654

End: 1315959

Strand: Direct

Name: rpl21e

Synonym: M1425_1390

Alternate gene names: 227827661

Gene position: 1315654-1315959 (Clockwise)

Preceding gene: 227827660

Following gene: 227827662

Centisome position: 50.43

GC content: 38.89

Gene sequence:

>306_bases
ATGGTTAAACATTCGAGGGGTTATCGAACTAGATCAAGGAGTTTATTAAGAAAGAGTCCTAGAGAGAGGGGTGCAGTTCC
ATCTCTAAGCAGACTAATGGTTGAATATAAGGAAGGAGATAAGGTCGTAATAAAGATAAACCCATCAGTACATTCCGGTA
TGCCTCATAGACGGTATCAAGGTAAAGTAGGGAAAATTATTGGAAAAAGAGGTAGGGCATATTTAGTTTCGGTCACATTG
GGCGATAAGGAAAAGGTAATAATTGTTAGGCCTGAACATTTGGTTTCTTTTAGTTCTAGTGGGTGA

Upstream 100 bases:

>100_bases
GGCACCCCCGCAATCTATTATACTGAGTTCAGTTTTACCTTATATGTTTTTCCAACAAAAATCTTAATTATGTGGCATAT
AATGAGTAAGAGGGAATATT

Downstream 100 bases:

>100_bases
TTAGTATTTGTCATCTGTATACATAGTTGAGGAGCACTATATTCCTTACTCAGTAGCGAAAAAATTACTAAGTGATGTAA
TTAAATCTGGCAGTTCATCT

Product: 50S ribosomal protein L21e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MVKHSRGYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKIIGKRGRAYLVSVTL
GDKEKVIIVRPEHLVSFSSSG

Sequences:

>Translated_101_residues
MVKHSRGYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKIIGKRGRAYLVSVTL
GDKEKVIIVRPEHLVSFSSSG
>Mature_101_residues
MVKHSRGYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKIIGKRGRAYLVSVTL
GDKEKVIIVRPEHLVSFSSSG

Specific function: Unknown

COG id: COG2139

COG function: function code J; Ribosomal protein L21E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L21e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6319668, Length=94, Percent_Identity=39.3617021276596, Blast_Score=59, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL21_SULIA (C3N5P7)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843367.1
- GeneID:   7814207
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1440
- OMA:   RFHGKTG
- ProtClustDB:   PRK04306
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00369
- InterPro:   IPR001147
- InterPro:   IPR022856
- InterPro:   IPR018259
- InterPro:   IPR008991
- PANTHER:   PTHR20981

Pfam domain/function: PF01157 Ribosomal_L21e; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 11384; Mature: 11384

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: PS01171 RIBOSOMAL_L21E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHSRGYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQ
CCCCCCCCCHHHHHHHHCCCHHCCCCCCHHHHHEEECCCCEEEEEECCCHHCCCCCCCCC
GKVGKIIGKRGRAYLVSVTLGDKEKVIIVRPEHLVSFSSSG
CCHHHHCCCCCCEEEEEEEECCCCCEEEECCHHHEEECCCC
>Mature Secondary Structure
MVKHSRGYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQ
CCCCCCCCCHHHHHHHHCCCHHCCCCCCHHHHHEEECCCCEEEEEECCCHHCCCCCCCCC
GKVGKIIGKRGRAYLVSVTLGDKEKVIIVRPEHLVSFSSSG
CCHHHHCCCCCCEEEEEEEECCCCCEEEECCHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA