| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827447
Identifier: 227827447
GI number: 227827447
Start: 1103437
End: 1105731
Strand: Direct
Name: 227827447
Synonym: M1425_1167
Alternate gene names: NA
Gene position: 1103437-1105731 (Clockwise)
Preceding gene: 227827441
Following gene: 227827456
Centisome position: 42.3
GC content: 37.52
Gene sequence:
>2295_bases ATGCAGTCAGTTAAGGGATTAAGAAGAGATTTACGGAAGACATCATTCATAGATTTACCCCTAATAGTAGGTCTTTCATT AGTTTCGATATTAATTAGAAGCCTAAGTGCTAATTGGCCTTTAGCAGTTAACGAATTCGATCCTTGGTATCTTTTCTATA ATGCATTATTGATAGCTCAAGTTCATGGAAATTGGTACGCAGTACCTCCAGACGTATTAGGTTGGTTACCATGGGGATAC TTCATTGAATTGGGGAATACTATAGGTTTGCCCTTCTTAGTAGCATTAGCCTCTTTGCCCTTCTATGGAACTTACGGAGC AAACGCAGTATATACGGTGGCAATATTTTCTGATATTTTGTTAGCTGGACTAGGAGTTGTAGCATCATATCTTTCGATAG AGTCCATAACTAATAGCAGATTAGCTGGTTATATGGCAGCTGCAATAATCGCAGTTTCTCCTGCGTTAACATATAAGAAC TTGTTAGGTGGTCTTCCTAAGACATCTTGGGGTGCAGTGTTTATCCTATTTGCAATTTTCCTCTTTAATCAAGGCTTAAA GAAGAAGAACATCTGGTATGGTGTACCCGCAGGTTTTGTGTTATTTTTAGCCGAGATCTCTTGGGGAGGTTATACATATA TTGACTTAAGTTTGCTCGTAGCAGCGTTCTTACTAATTTTACTGAATAGAAATGATGAGACTACTGCAAACTTGTACACA ATAATGGTAGTTGTAACTTCATTTCTAACTTCATTAGCCCCAAATAATATAGGTTTCATGTCTGGGTTAGCACACGGCCT ATCACTACTCTTAATTTCAGCAGTTCTTTATTTAGACTTATATCTATCTAAAACGCTACCTAAAGAAATCGTAGATTCAA GAAATCTAATAGTAATTGCAGTACTAATTTTCATATTCACCATAGGATTATCTGGGCTATCAATACTAAGACCTACATCA GCGCCAATACCATCAAGGTATTACGCTATAATAAACCCGTTTTATCAAGTTACAATACCGATAGATAAGACAGTAGCAGA GTATATTCCCCAGCCGATAACTGCAATGATACAAGATTTCGGAATAGCACTATTTTTGTCAGTCATAGGGATGTATTACT TGATAAGAAAAGGAAACCTAGTAGGTTTATGGTTATTGGTATTGGGAGTTGCTAGCATATTTGGCACATCACAACAGCCC TACCTATTTAACTATACAGCCTATATGGTAGCTGCCTTAGGAGGTTTAGGAGTTTATTACATTGCAGATAACCTACTAAA GGGAGTGAAAAATGGAAACAGCAGCAAAATTTTAGTAGGCTTTTTCTTAGCTATTGTAGGAATATCCTTAGTAGCAGATG CTGGATTGGCAACACTAGCGAGCAATGAACCTCCGGCAATAACCAATGCTGCTACAAGCTTCTTAACAACTAACTACTCT TGGGTATCTGCAGCAAATTGGATAAGAACCCATTCACCACAACACGCGTTTGTATTATCCTGGTGGGATTATGGGTATTG GCTGGAGGTCTTGACAAATAGGAGCGTTATAGATGAAAATAATACGCTTAATGGTACACAAATTAAACTAATGGCAGAAA TGTTCTTGAACAATGAAACTTTCGCAGCGAATGTCCTAGAAAAATATTTCCACCTGTATCCTTATGGTAGTCCAAACTAT ACTATACCAGTTTATATAGTGGCATATGATGCTGTTACGCTAGTATATTCTGGCAATCAAGCCCAATGGTACGTAGGATA CCCACCTAGTTTACCTAATGCGTTCTTTGGATATACAACAAGTTTAGGAGATATTGGAAAGGCTATGGGAGCAATGACAA CAATAGCTGGATATCCTCTAGAAGAATACATAAACCTAACCGAATTAAATAATACAATAACACAAATAATTAATACCTAT GCAACTACTAATCCAACTATTGCCCAAGCATTAGCTTCACAAGTTTCACAAGCTGAACCATTTGCATGGACCCCTAAAGC ATATAACTCACTTATAGTCCAAATGTTCATTGAGAGTCTGTATCAAATAGGATACGGACAACCAATAGCTCCATTCACAA CACAAATAATTCCTAGCAGTTCTGGATATATTATAACGGGATCTCCATTACCACGTGTTCAACTAATGTATTTCCAACCT GCATATATAGCACTATTCCCGGTAGGAAATGGAGGTGCTGGAGGAGTTCCCTACACTACTTACATAATGGTCATGGTATA CCAGTTTACACAGCCCGGTGTTATACTAAAACCTACAGTAGTAATCAACAGTTAA
Upstream 100 bases:
>100_bases TATGAAGTTAGAGCTTTATTTTTAAAATGATTCTCTGTAAACTAAAACTGTATGCTTGGAATAAGTTTAATAAATGTATA ATACTTAATACACTACAGCC
Downstream 100 bases:
>100_bases GCTTTACTCCTTTTTTTAATTCAATCCTATATTTTACGTATTTATCTTCTGGAGAAAATCTAGATGGATGAGGAATCATA GTCTTAGAGCCGCATACAGG
Product: oligosaccharyl transferase STT3 subunit
Products: NA
Alternate protein names: Dolichyl-Diphosphooligosaccharide-Protein Glycotransferase; Oligosaccharyl Transferase
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MQSVKGLRRDLRKTSFIDLPLIVGLSLVSILIRSLSANWPLAVNEFDPWYLFYNALLIAQVHGNWYAVPPDVLGWLPWGY FIELGNTIGLPFLVALASLPFYGTYGANAVYTVAIFSDILLAGLGVVASYLSIESITNSRLAGYMAAAIIAVSPALTYKN LLGGLPKTSWGAVFILFAIFLFNQGLKKKNIWYGVPAGFVLFLAEISWGGYTYIDLSLLVAAFLLILLNRNDETTANLYT IMVVVTSFLTSLAPNNIGFMSGLAHGLSLLLISAVLYLDLYLSKTLPKEIVDSRNLIVIAVLIFIFTIGLSGLSILRPTS APIPSRYYAIINPFYQVTIPIDKTVAEYIPQPITAMIQDFGIALFLSVIGMYYLIRKGNLVGLWLLVLGVASIFGTSQQP YLFNYTAYMVAALGGLGVYYIADNLLKGVKNGNSSKILVGFFLAIVGISLVADAGLATLASNEPPAITNAATSFLTTNYS WVSAANWIRTHSPQHAFVLSWWDYGYWLEVLTNRSVIDENNTLNGTQIKLMAEMFLNNETFAANVLEKYFHLYPYGSPNY TIPVYIVAYDAVTLVYSGNQAQWYVGYPPSLPNAFFGYTTSLGDIGKAMGAMTTIAGYPLEEYINLTELNNTITQIINTY ATTNPTIAQALASQVSQAEPFAWTPKAYNSLIVQMFIESLYQIGYGQPIAPFTTQIIPSSSGYIITGSPLPRVQLMYFQP AYIALFPVGNGGAGGVPYTTYIMVMVYQFTQPGVILKPTVVINS
Sequences:
>Translated_764_residues MQSVKGLRRDLRKTSFIDLPLIVGLSLVSILIRSLSANWPLAVNEFDPWYLFYNALLIAQVHGNWYAVPPDVLGWLPWGY FIELGNTIGLPFLVALASLPFYGTYGANAVYTVAIFSDILLAGLGVVASYLSIESITNSRLAGYMAAAIIAVSPALTYKN LLGGLPKTSWGAVFILFAIFLFNQGLKKKNIWYGVPAGFVLFLAEISWGGYTYIDLSLLVAAFLLILLNRNDETTANLYT IMVVVTSFLTSLAPNNIGFMSGLAHGLSLLLISAVLYLDLYLSKTLPKEIVDSRNLIVIAVLIFIFTIGLSGLSILRPTS APIPSRYYAIINPFYQVTIPIDKTVAEYIPQPITAMIQDFGIALFLSVIGMYYLIRKGNLVGLWLLVLGVASIFGTSQQP YLFNYTAYMVAALGGLGVYYIADNLLKGVKNGNSSKILVGFFLAIVGISLVADAGLATLASNEPPAITNAATSFLTTNYS WVSAANWIRTHSPQHAFVLSWWDYGYWLEVLTNRSVIDENNTLNGTQIKLMAEMFLNNETFAANVLEKYFHLYPYGSPNY TIPVYIVAYDAVTLVYSGNQAQWYVGYPPSLPNAFFGYTTSLGDIGKAMGAMTTIAGYPLEEYINLTELNNTITQIINTY ATTNPTIAQALASQVSQAEPFAWTPKAYNSLIVQMFIESLYQIGYGQPIAPFTTQIIPSSSGYIITGSPLPRVQLMYFQP AYIALFPVGNGGAGGVPYTTYIMVMVYQFTQPGVILKPTVVINS >Mature_764_residues MQSVKGLRRDLRKTSFIDLPLIVGLSLVSILIRSLSANWPLAVNEFDPWYLFYNALLIAQVHGNWYAVPPDVLGWLPWGY FIELGNTIGLPFLVALASLPFYGTYGANAVYTVAIFSDILLAGLGVVASYLSIESITNSRLAGYMAAAIIAVSPALTYKN LLGGLPKTSWGAVFILFAIFLFNQGLKKKNIWYGVPAGFVLFLAEISWGGYTYIDLSLLVAAFLLILLNRNDETTANLYT IMVVVTSFLTSLAPNNIGFMSGLAHGLSLLLISAVLYLDLYLSKTLPKEIVDSRNLIVIAVLIFIFTIGLSGLSILRPTS APIPSRYYAIINPFYQVTIPIDKTVAEYIPQPITAMIQDFGIALFLSVIGMYYLIRKGNLVGLWLLVLGVASIFGTSQQP YLFNYTAYMVAALGGLGVYYIADNLLKGVKNGNSSKILVGFFLAIVGISLVADAGLATLASNEPPAITNAATSFLTTNYS WVSAANWIRTHSPQHAFVLSWWDYGYWLEVLTNRSVIDENNTLNGTQIKLMAEMFLNNETFAANVLEKYFHLYPYGSPNY TIPVYIVAYDAVTLVYSGNQAQWYVGYPPSLPNAFFGYTTSLGDIGKAMGAMTTIAGYPLEEYINLTELNNTITQIINTY ATTNPTIAQALASQVSQAEPFAWTPKAYNSLIVQMFIESLYQIGYGQPIAPFTTQIIPSSSGYIITGSPLPRVQLMYFQP AYIALFPVGNGGAGGVPYTTYIMVMVYQFTQPGVILKPTVVINS
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22749415, Length=590, Percent_Identity=21.6949152542373, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI30578410, Length=370, Percent_Identity=22.7027027027027, Blast_Score=67, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17555006, Length=578, Percent_Identity=23.1833910034602, Blast_Score=113, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6321416, Length=545, Percent_Identity=22.0183486238532, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI20129103, Length=593, Percent_Identity=23.2715008431703, Blast_Score=127, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83692; Mature: 83692
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00251 TNF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVKGLRRDLRKTSFIDLPLIVGLSLVSILIRSLSANWPLAVNEFDPWYLFYNALLIAQ CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHEEE VHGNWYAVPPDVLGWLPWGYFIELGNTIGLPFLVALASLPFYGTYGANAVYTVAIFSDIL ECCCEEECCHHHHHHCCHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LAGLGVVASYLSIESITNSRLAGYMAAAIIAVSPALTYKNLLGGLPKTSWGAVFILFAIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LFNQGLKKKNIWYGVPAGFVLFLAEISWGGYTYIDLSLLVAAFLLILLNRNDETTANLYT HHCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH IMVVVTSFLTSLAPNNIGFMSGLAHGLSLLLISAVLYLDLYLSKTLPKEIVDSRNLIVIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH VLIFIFTIGLSGLSILRPTSAPIPSRYYAIINPFYQVTIPIDKTVAEYIPQPITAMIQDF HHHHHHHHCCCCCEEECCCCCCCCCCHHEEECCEEEEEECHHHHHHHHCCCHHHHHHHHH GIALFLSVIGMYYLIRKGNLVGLWLLVLGVASIFGTSQQPYLFNYTAYMVAALGGLGVYY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHH IADNLLKGVKNGNSSKILVGFFLAIVGISLVADAGLATLASNEPPAITNAATSFLTTNYS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCCC WVSAANWIRTHSPQHAFVLSWWDYGYWLEVLTNRSVIDENNTLNGTQIKLMAEMFLNNET HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCH FAANVLEKYFHLYPYGSPNYTIPVYIVAYDAVTLVYSGNQAQWYVGYPPSLPNAFFGYTT HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHCCCC SLGDIGKAMGAMTTIAGYPLEEYINLTELNNTITQIINTYATTNPTIAQALASQVSQAEP CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC FAWTPKAYNSLIVQMFIESLYQIGYGQPIAPFTTQIIPSSSGYIITGSPLPRVQLMYFQP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEECCCCCCEEEEEECC AYIALFPVGNGGAGGVPYTTYIMVMVYQFTQPGVILKPTVVINS EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECEEEECC >Mature Secondary Structure MQSVKGLRRDLRKTSFIDLPLIVGLSLVSILIRSLSANWPLAVNEFDPWYLFYNALLIAQ CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHEEE VHGNWYAVPPDVLGWLPWGYFIELGNTIGLPFLVALASLPFYGTYGANAVYTVAIFSDIL ECCCEEECCHHHHHHCCHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LAGLGVVASYLSIESITNSRLAGYMAAAIIAVSPALTYKNLLGGLPKTSWGAVFILFAIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LFNQGLKKKNIWYGVPAGFVLFLAEISWGGYTYIDLSLLVAAFLLILLNRNDETTANLYT HHCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHH IMVVVTSFLTSLAPNNIGFMSGLAHGLSLLLISAVLYLDLYLSKTLPKEIVDSRNLIVIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH VLIFIFTIGLSGLSILRPTSAPIPSRYYAIINPFYQVTIPIDKTVAEYIPQPITAMIQDF HHHHHHHHCCCCCEEECCCCCCCCCCHHEEECCEEEEEECHHHHHHHHCCCHHHHHHHHH GIALFLSVIGMYYLIRKGNLVGLWLLVLGVASIFGTSQQPYLFNYTAYMVAALGGLGVYY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHH IADNLLKGVKNGNSSKILVGFFLAIVGISLVADAGLATLASNEPPAITNAATSFLTTNYS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCCC WVSAANWIRTHSPQHAFVLSWWDYGYWLEVLTNRSVIDENNTLNGTQIKLMAEMFLNNET HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCH FAANVLEKYFHLYPYGSPNYTIPVYIVAYDAVTLVYSGNQAQWYVGYPPSLPNAFFGYTT HHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHCCCC SLGDIGKAMGAMTTIAGYPLEEYINLTELNNTITQIINTYATTNPTIAQALASQVSQAEP CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC FAWTPKAYNSLIVQMFIESLYQIGYGQPIAPFTTQIIPSSSGYIITGSPLPRVQLMYFQP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEECCCCCCEEEEEECC AYIALFPVGNGGAGGVPYTTYIMVMVYQFTQPGVILKPTVVINS EEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA