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The map label for this gene is 227827218

Identifier: 227827218

GI number: 227827218

Start: 866516

End: 867235

Strand: Direct

Name: 227827218

Synonym: M1425_0904

Alternate gene names: NA

Gene position: 866516-867235 (Clockwise)

Preceding gene: 227827217

Following gene: 227827219

Centisome position: 33.21

GC content: 34.03

Gene sequence:

>720_bases
TTGATCAAGCCTTGCGCTTATGAGAAACAAGGTTTAATTGATCACGCTATTGGTTCTTATAGGGTTTTAGATGGTAAAAT
AAGTGAGTCTTATTATAAGATTATCTCGAGAAGGTTGGAGAGATATGGAATAGTTCTTGATCTAAACGGTGTTAAGGAAA
TAGTTAAGGACGTTGTTGTCCTTCACGATATAGGAAAAGCCGGGGAGTATTACCAGAATCAGTTTGACGATAATTGTAAT
CCTCTAAAGAGTAACTTCTCTTTCATATATCATGAACTTGGTTCGGCTCTATTTTTCTATAATGATTATGAACTTATTGA
CGTCGAGAAAGCTGAGGAGGTTAAGTCTTTGTTGACTTTAGCTGTTCTAAATCACTTGAACGCAATTAGGGGGATATCTG
ATTATCTAGTGAATAAGTTTCTAGACAAGTTTGATGAAAGGATGATAAAGCTTAATAATTACGGGAGTATTATGTTGCAA
AATCTAAGAGGTGTGATTTCCAAGAGCTTAAAAGTTAGTGATTACACTTTTGATGACTACCACGATATGCTGTATGCGTT
TTCTAAGAAGAGTGATAAGTATTTAAAGTTGTATAATCTTTTTTTAGCCCCAATAATGTTGGGGGATAATTTAGATAGTA
GTTTAGTTCGAAATAATGGAAGTAAAACCAGATTTGTTCGTATATTGGAGGGTGAGTTAAATGGAGGTTCCACTTTATAA

Upstream 100 bases:

>100_bases
TTAAATTATATAACAAGAAATGCCTTCAATTGGAAATGTTGAAGAATGATATTTTAGGAGTTAGGATTCAAGATTATAAT
AGTGAAATAGGTGGTGTGTA

Downstream 100 bases:

>100_bases
TATATTTGGAGATAATTACATAATTCAAGTCGCAACGGAGGCAGAGAATTCAACTATATACAATAATAAAGTGGAAATAG
ACGATGAAGAGTTAAGAAAT

Product: CRISPR-associated HD domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIKPCAYEKQGLIDHAIGSYRVLDGKISESYYKIISRRLERYGIVLDLNGVKEIVKDVVVLHDIGKAGEYYQNQFDDNCN
PLKSNFSFIYHELGSALFFYNDYELIDVEKAEEVKSLLTLAVLNHLNAIRGISDYLVNKFLDKFDERMIKLNNYGSIMLQ
NLRGVISKSLKVSDYTFDDYHDMLYAFSKKSDKYLKLYNLFLAPIMLGDNLDSSLVRNNGSKTRFVRILEGELNGGSTL

Sequences:

>Translated_239_residues
MIKPCAYEKQGLIDHAIGSYRVLDGKISESYYKIISRRLERYGIVLDLNGVKEIVKDVVVLHDIGKAGEYYQNQFDDNCN
PLKSNFSFIYHELGSALFFYNDYELIDVEKAEEVKSLLTLAVLNHLNAIRGISDYLVNKFLDKFDERMIKLNNYGSIMLQ
NLRGVISKSLKVSDYTFDDYHDMLYAFSKKSDKYLKLYNLFLAPIMLGDNLDSSLVRNNGSKTRFVRILEGELNGGSTL
>Mature_239_residues
MIKPCAYEKQGLIDHAIGSYRVLDGKISESYYKIISRRLERYGIVLDLNGVKEIVKDVVVLHDIGKAGEYYQNQFDDNCN
PLKSNFSFIYHELGSALFFYNDYELIDVEKAEEVKSLLTLAVLNHLNAIRGISDYLVNKFLDKFDERMIKLNNYGSIMLQ
NLRGVISKSLKVSDYTFDDYHDMLYAFSKKSDKYLKLYNLFLAPIMLGDNLDSSLVRNNGSKTRFVRILEGELNGGSTL

Specific function: Unknown

COG id: COG2254

COG function: function code L; Predicted HD superfamily hydrolase, possibly a nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27450; Mature: 27450

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPCAYEKQGLIDHAIGSYRVLDGKISESYYKIISRRLERYGIVLDLNGVKEIVKDVVV
CCCCCCCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
LHDIGKAGEYYQNQFDDNCNPLKSNFSFIYHELGSALFFYNDYELIDVEKAEEVKSLLTL
HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHH
AVLNHLNAIRGISDYLVNKFLDKFDERMIKLNNYGSIMLQNLRGVISKSLKVSDYTFDDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
HDMLYAFSKKSDKYLKLYNLFLAPIMLGDNLDSSLVRNNGSKTRFVRILEGELNGGSTL
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIKPCAYEKQGLIDHAIGSYRVLDGKISESYYKIISRRLERYGIVLDLNGVKEIVKDVVV
CCCCCCCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
LHDIGKAGEYYQNQFDDNCNPLKSNFSFIYHELGSALFFYNDYELIDVEKAEEVKSLLTL
HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHH
AVLNHLNAIRGISDYLVNKFLDKFDERMIKLNNYGSIMLQNLRGVISKSLKVSDYTFDDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
HDMLYAFSKKSDKYLKLYNLFLAPIMLGDNLDSSLVRNNGSKTRFVRILEGELNGGSTL
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA