| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is alkK [H]
Identifier: 227826708
GI number: 227826708
Start: 261866
End: 263536
Strand: Direct
Name: alkK [H]
Synonym: M1425_0300
Alternate gene names: 227826708
Gene position: 261866-263536 (Clockwise)
Preceding gene: 227826707
Following gene: 227826709
Centisome position: 10.04
GC content: 37.76
Gene sequence:
>1671_bases GTGGAGATAATAAAAGGTTTTCCTTCAACTATGATGGACGACTATCAACTTAATGTTGTGCAAATATTGGAACATGCAGG GAAATGGTATGGGGAACAAGAAATCGTCTCTAGGAGAAAGGATAATACGATCTTTAGATACAATTATAGGGAAGCATTTA GAAGGGTTAAGAAACTTGCAAGTTCGCTTAAGTCTTTAGGGGTTAAGGTGGGTGATAGAGTAGGTGTACTAGAATGGAAC ACGCATAGGTTTTACGAATTATACTTCGCAATCCCTGCTACTGGTGCTGTAATGTTAGAGCTAAATCCTAGACTTCACCC ACTTCAACTGGCAAAGATTATTAACCACTCTAAAGTATCATTTCTTTTCTTGAACGAGGACTTCATTCCTTTAGTTGAGA GTATATCAAACAATATACCGTCCGTTAAGAAGCTCATATTGATTTCCGACACTGAGAAGATGCATCGAAATAGTTACTAC GATTACGAGACATTGGTAGAGGAAGGTGATGAGGAATATGAGATACCAATGTTCGATGAGAGGACGTCGTGCTATGCAGC ATATACTACTGGTACTACTGGAGACCCTAAAGGGATATATTATTCACATAGATCAATTGTATTAAATACACTAGTAATAT CACGTAATATCACAATAGATGATACTTTTATGCAATTAGTACCTATGTTTCACGTAAATGGTTGGTTAGGATTTATGGCT ACTACACTAGTTGGAGCTAAGTTAGTGTTACCAGGGAGATATACTGCAGATAACCCAGGACCGTTAGTTGACTTAATGAT TAACGAGAAAGTTACAGTTACGGCTGGTGTTCCAGAAGTGTTCAGTTCAATTTTAAACTATTTAAGGAACATGGAAAACA AACCATTATTTGTGAATTCTAGAATACTCATAGGAGGAAGCGAGCCTCCTCTAAGCTTAGTAATAGGTCTGATGGAGTTT GGATTTCAGGTTGGACAAGGATATGGTGCTACTGAAACTACACCTTCAGTCGCAGGCAGTATTGTTAAACCCAAAATAAA GGAAAGATATTCTGAAAAGGATATGTTGGATTTGTTGAGAAAACAAGGTATACCAGCTTTTGGAATTGATATAAAGGTAG TTGATCCTTCAACTGGTAAAGAGGTTCCTCATGATGGTAAAACTATAGGTGAGTTATGGATCAGAGGGCCCTGGATTGCT TCTGCCTACTATAATGATCCCAGAACTGTAGAGTCTTTTGTAGGTGATGGTGTAGATAGATGGTGGAGAAGTGGTGATTT AGCTGTAGTAGATGAGCTAGGTTATATTAAAATAGTAGATAGGATAAAGGACGTTATAAAGAGTGGGGGAGAATGGATAA GTACAGTAGATTTGGAGAACCACTTAATGACCCATCCAGCTGTAGCTGAGGCTACAGTTATAGGTATTCCTCACCCTAAG TGGGGGGAGAGACCATTAGCTTTCGTTATTTTAAGGCAAGGGTTTGAAAATAAGATAAGTAAGCAGGAACTATTAGGGTA TTTAAGCCAGAGATTTGCCAAATGGCAGCTACCTGATGATATAATATTCGTCAAGGAGATTCCTAAGACTAGTGTGGGGA AATTTGATAAGAAGGTTTTAAGGGAAAAATATAGAGATTTCTTTACTAGTGGTAGAAAAGAAAGTATTTAA
Upstream 100 bases:
>100_bases GGTAAGAAATACCCATTATTTAAGGTTGCCTAGCTCTTAGTTTCATTTTTTATCTATAAAGGTAAAAAAGCTTAAATATA GAAAAGATTACATATTACAT
Downstream 100 bases:
>100_bases AGTGAAGAGGAGGTATTAAAATTATGAGTAAAAATGAGGATGAATTGGAAGAGTACAGAAGTAAGATAAGGGAGTGGATA AGGAATAATGTACCGGAGGA
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Medium-chain acyl-CoA synthetase [H]
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MEIIKGFPSTMMDDYQLNVVQILEHAGKWYGEQEIVSRRKDNTIFRYNYREAFRRVKKLASSLKSLGVKVGDRVGVLEWN THRFYELYFAIPATGAVMLELNPRLHPLQLAKIINHSKVSFLFLNEDFIPLVESISNNIPSVKKLILISDTEKMHRNSYY DYETLVEEGDEEYEIPMFDERTSCYAAYTTGTTGDPKGIYYSHRSIVLNTLVISRNITIDDTFMQLVPMFHVNGWLGFMA TTLVGAKLVLPGRYTADNPGPLVDLMINEKVTVTAGVPEVFSSILNYLRNMENKPLFVNSRILIGGSEPPLSLVIGLMEF GFQVGQGYGATETTPSVAGSIVKPKIKERYSEKDMLDLLRKQGIPAFGIDIKVVDPSTGKEVPHDGKTIGELWIRGPWIA SAYYNDPRTVESFVGDGVDRWWRSGDLAVVDELGYIKIVDRIKDVIKSGGEWISTVDLENHLMTHPAVAEATVIGIPHPK WGERPLAFVILRQGFENKISKQELLGYLSQRFAKWQLPDDIIFVKEIPKTSVGKFDKKVLREKYRDFFTSGRKESI
Sequences:
>Translated_556_residues MEIIKGFPSTMMDDYQLNVVQILEHAGKWYGEQEIVSRRKDNTIFRYNYREAFRRVKKLASSLKSLGVKVGDRVGVLEWN THRFYELYFAIPATGAVMLELNPRLHPLQLAKIINHSKVSFLFLNEDFIPLVESISNNIPSVKKLILISDTEKMHRNSYY DYETLVEEGDEEYEIPMFDERTSCYAAYTTGTTGDPKGIYYSHRSIVLNTLVISRNITIDDTFMQLVPMFHVNGWLGFMA TTLVGAKLVLPGRYTADNPGPLVDLMINEKVTVTAGVPEVFSSILNYLRNMENKPLFVNSRILIGGSEPPLSLVIGLMEF GFQVGQGYGATETTPSVAGSIVKPKIKERYSEKDMLDLLRKQGIPAFGIDIKVVDPSTGKEVPHDGKTIGELWIRGPWIA SAYYNDPRTVESFVGDGVDRWWRSGDLAVVDELGYIKIVDRIKDVIKSGGEWISTVDLENHLMTHPAVAEATVIGIPHPK WGERPLAFVILRQGFENKISKQELLGYLSQRFAKWQLPDDIIFVKEIPKTSVGKFDKKVLREKYRDFFTSGRKESI >Mature_556_residues MEIIKGFPSTMMDDYQLNVVQILEHAGKWYGEQEIVSRRKDNTIFRYNYREAFRRVKKLASSLKSLGVKVGDRVGVLEWN THRFYELYFAIPATGAVMLELNPRLHPLQLAKIINHSKVSFLFLNEDFIPLVESISNNIPSVKKLILISDTEKMHRNSYY DYETLVEEGDEEYEIPMFDERTSCYAAYTTGTTGDPKGIYYSHRSIVLNTLVISRNITIDDTFMQLVPMFHVNGWLGFMA TTLVGAKLVLPGRYTADNPGPLVDLMINEKVTVTAGVPEVFSSILNYLRNMENKPLFVNSRILIGGSEPPLSLVIGLMEF GFQVGQGYGATETTPSVAGSIVKPKIKERYSEKDMLDLLRKQGIPAFGIDIKVVDPSTGKEVPHDGKTIGELWIRGPWIA SAYYNDPRTVESFVGDGVDRWWRSGDLAVVDELGYIKIVDRIKDVIKSGGEWISTVDLENHLMTHPAVAEATVIGIPHPK WGERPLAFVILRQGFENKISKQELLGYLSQRFAKWQLPDDIIFVKEIPKTSVGKFDKKVLREKYRDFFTSGRKESI
Specific function: Unknown
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI187761345, Length=541, Percent_Identity=26.0628465804067, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI187761343, Length=541, Percent_Identity=26.0628465804067, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI156151445, Length=562, Percent_Identity=25.2669039145907, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI122937307, Length=514, Percent_Identity=25.4863813229572, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI58082049, Length=513, Percent_Identity=25.3411306042885, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI157311624, Length=518, Percent_Identity=26.0617760617761, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI157311622, Length=518, Percent_Identity=26.0617760617761, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI28416953, Length=542, Percent_Identity=24.7232472324723, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI42544132, Length=561, Percent_Identity=22.4598930481283, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI38505220, Length=515, Percent_Identity=24.4660194174757, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI115511026, Length=540, Percent_Identity=22.7777777777778, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI253970489, Length=155, Percent_Identity=33.5483870967742, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI8923896, Length=155, Percent_Identity=33.5483870967742, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI145693145, Length=544, Percent_Identity=27.2058823529412, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1788107, Length=572, Percent_Identity=24.6503496503496, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI221142682, Length=532, Percent_Identity=23.6842105263158, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1786810, Length=514, Percent_Identity=26.2645914396887, Blast_Score=135, Evalue=8e-33, Organism=Escherichia coli, GI1789201, Length=375, Percent_Identity=27.2, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788595, Length=500, Percent_Identity=24.2, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790505, Length=181, Percent_Identity=31.4917127071823, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558820, Length=518, Percent_Identity=27.992277992278, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994703, Length=545, Percent_Identity=25.5045871559633, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71994694, Length=545, Percent_Identity=25.5045871559633, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71994690, Length=545, Percent_Identity=25.5045871559633, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32563687, Length=514, Percent_Identity=27.431906614786, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17559526, Length=533, Percent_Identity=24.577861163227, Blast_Score=145, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17560308, Length=534, Percent_Identity=26.4044943820225, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17531443, Length=533, Percent_Identity=22.1388367729831, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17560140, Length=526, Percent_Identity=23.1939163498099, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17557194, Length=541, Percent_Identity=23.2902033271719, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71996755, Length=552, Percent_Identity=24.8188405797101, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17538037, Length=534, Percent_Identity=23.4082397003745, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71985884, Length=381, Percent_Identity=24.6719160104987, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319699, Length=374, Percent_Identity=27.5401069518717, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6319264, Length=553, Percent_Identity=24.2314647377938, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323182, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320852, Length=350, Percent_Identity=26.8571428571429, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24581924, Length=552, Percent_Identity=27.3550724637681, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI18859661, Length=477, Percent_Identity=28.5115303983228, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI21355181, Length=518, Percent_Identity=28.3783783783784, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24648260, Length=517, Percent_Identity=23.5976789168279, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI24656500, Length=504, Percent_Identity=22.0238095238095, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24653035, Length=517, Percent_Identity=22.0502901353965, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI19922652, Length=497, Percent_Identity=21.1267605633803, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI17933690, Length=504, Percent_Identity=22.0238095238095, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI62471681, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62471687, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24586634, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI22026970, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62471689, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62471679, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62471683, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62471685, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24586636, Length=443, Percent_Identity=23.7020316027088, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI62472339, Length=185, Percent_Identity=30.8108108108108, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24667955, Length=185, Percent_Identity=30.8108108108108, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI281365686, Length=505, Percent_Identity=22.7722772277228, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24667959, Length=185, Percent_Identity=30.8108108108108, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI21358303, Length=508, Percent_Identity=21.259842519685, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24648253, Length=507, Percent_Identity=24.0631163708087, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583465, Length=478, Percent_Identity=22.3849372384937, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24583463, Length=478, Percent_Identity=22.3849372384937, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281364798, Length=478, Percent_Identity=22.3849372384937, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24648255, Length=507, Percent_Identity=24.2603550295858, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: NA
Molecular weight: Translated: 63066; Mature: 63066
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIKGFPSTMMDDYQLNVVQILEHAGKWYGEQEIVSRRKDNTIFRYNYREAFRRVKKLA CCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHH SSLKSLGVKVGDRVGVLEWNTHRFYELYFAIPATGAVMLELNPRLHPLQLAKIINHSKVS HHHHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEE FLFLNEDFIPLVESISNNIPSVKKLILISDTEKMHRNSYYDYETLVEEGDEEYEIPMFDE EEEECCCHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCHHHHHHCCCCCCCCCCCCC RTSCYAAYTTGTTGDPKGIYYSHRSIVLNTLVISRNITIDDTFMQLVPMFHVNGWLGFMA CCCEEEEEECCCCCCCCCEEEECHHEEEEEEEEECCCEECHHHHHHHHHHHCCHHHHHHH TTLVGAKLVLPGRYTADNPGPLVDLMINEKVTVTAGVPEVFSSILNYLRNMENKPLFVNS HHHHCCEEEECCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEC RILIGGSEPPLSLVIGLMEFGFQVGQGYGATETTPSVAGSIVKPKIKERYSEKDMLDLLR EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHH KQGIPAFGIDIKVVDPSTGKEVPHDGKTIGELWIRGPWIASAYYNDPRTVESFVGDGVDR HCCCCEECEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHCCCHHH WWRSGDLAVVDELGYIKIVDRIKDVIKSGGEWISTVDLENHLMTHPAVAEATVIGIPHPK HHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHCEEEEECCCCC WGERPLAFVILRQGFENKISKQELLGYLSQRFAKWQLPDDIIFVKEIPKTSVGKFDKKVL CCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH REKYRDFFTSGRKESI HHHHHHHHHCCCCCCC >Mature Secondary Structure MEIIKGFPSTMMDDYQLNVVQILEHAGKWYGEQEIVSRRKDNTIFRYNYREAFRRVKKLA CCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHH SSLKSLGVKVGDRVGVLEWNTHRFYELYFAIPATGAVMLELNPRLHPLQLAKIINHSKVS HHHHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEE FLFLNEDFIPLVESISNNIPSVKKLILISDTEKMHRNSYYDYETLVEEGDEEYEIPMFDE EEEECCCHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCHHHHHHCCCCCCCCCCCCC RTSCYAAYTTGTTGDPKGIYYSHRSIVLNTLVISRNITIDDTFMQLVPMFHVNGWLGFMA CCCEEEEEECCCCCCCCCEEEECHHEEEEEEEEECCCEECHHHHHHHHHHHCCHHHHHHH TTLVGAKLVLPGRYTADNPGPLVDLMINEKVTVTAGVPEVFSSILNYLRNMENKPLFVNS HHHHCCEEEECCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEC RILIGGSEPPLSLVIGLMEFGFQVGQGYGATETTPSVAGSIVKPKIKERYSEKDMLDLLR EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHH KQGIPAFGIDIKVVDPSTGKEVPHDGKTIGELWIRGPWIASAYYNDPRTVESFVGDGVDR HCCCCEECEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHCCCHHH WWRSGDLAVVDELGYIKIVDRIKDVIKSGGEWISTVDLENHLMTHPAVAEATVIGIPHPK HHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHCEEEEECCCCC WGERPLAFVILRQGFENKISKQELLGYLSQRFAKWQLPDDIIFVKEIPKTSVGKFDKKVL CCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH REKYRDFFTSGRKESI HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1453953 [H]