| Definition | Sinorhizobium fredii NGR234 chromosome, complete genome. |
|---|---|
| Accession | NC_012587 |
| Length | 3,925,702 |
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Identifier: 227823893
GI number:
Start: 3572650
End: 3576219
Strand: Reverse
Name: Not Available
Synonym: NGR_c33830
Alternate gene names: NA
Gene position: NA
Preceding gene: 227823894
Following gene: 227823892
Centisome position: NA
GC content: NA
Gene sequence:
>3570_bases ATGAGGAATGACACCTTCGGGACGGAGGAGAGGACGCCCAAGGCGTGGCTCGACTGGACGACGGAGCGCCAGTCGCTCGC CTCCGACCCGGCCCGATCGGCCTGGGTGTCGGCCAATGCCGGCTCCGGCAAGACGCATGTGCTGACGCAGCGGGTCATCC GGCTGCTGCTCGCCGGGTGCCGGCCATCCGCGATCCTCTGCCTGACCTATACGAAGGCGGCGGCTTCCGAGATGTCGAAC CGCATCTTCGAGCGCCTCGCCGAATGGGCGACGCTCGATGATGCCGCGCTTGAAAAACGGATCGAGACGATCGAGGGCAA ACGGCCTCCCCTTGCGAAGATCCACGAAGCCCGGCGGCTTTTTGCAAAGGCGCTCGAAACGCCCGGCGGGCTGAAGATCC AGACGATCCACGCCTTCTCCGAGGCCTTGCTGCACCAATTTCCGCTCGAAGCCAACGTGGCGGGACATTTTTCGGTCCTC GACGATCGTGCCGCGGCTGTGTTGCTTGCCGATGCGCGCCGCGCCCTGCTGAGCGCGACGGCCGCCGAGGGCGAGACCGA GCTTGCCGAGGCCTTCGCAACGGTCCTCGATCTCGCCGACGATACCGGCCTTGAAAAACTGCTTCAGGCGATCGTCGCAA ACCGCGCGCCCATCCAGGCCTTTCTCGACCACGCCTCCGCGCAAAGCGGGCGCGAACGGCAACTGCGTGCGGCGCTTGGC CTTGCTCCGACGGAATCGGCCGAGAGCGTCATGGCCGGCGCCTGGCCGCTGGCCGGTCTGAACGGCGCTGCGCTTGAGCA ATATATCGGGCTCGCGCTCAGCCTCGGCGGCGCGAAACCCGTCGAAATCGCCGAGGGCCTGAAGGCAGCCTGCAAGGTCA AGGACGCGGAGGAGCGCTTCGCCTCGCTGCTGAGCGTGTTCTTCAACGGCGGCGGCAAGCCGAAGGCCGAGTCTGCCTTC TTCAACAAGGCGATGCTGGCGCAGGCGCCGCATCTCGCACCGCTGATCGACGAAGCACGCCAACACATCGTCTCAACTGC CGATCGCCTCAGCATCGTGCGCATGTATGAGGCGACGCGGGCGGCACTGATCCTCGCGGAAAGGCTCAACGGGGATTACG AAGACCTCAAGAAGCGGCGCAGCCAGCTCGATTTCGAGGACCTGATCAACCGCACGGCCGCGCTGCTTTCGCGCAGCGAC GTCGGCGCCTGGGTCCACTACAAGCTCGACCAGGGCATCGACCATATCCTCGTCGACGAGGCGCAGGACACCAGCCCGGC GCAATGGACGATCATCCAGGCGCTCGCCGCCGATTTCTTCGCCGGCGAAACAGCGCGGGCCGACGACCGGACGATCTTTG CGGTCGGCGACGAGAAGCAGTCGATCTATTCCTTCCAGGGCGCTCGGCCGGAGCGCTTTTCGCGCGAAAGCGTGCTGACC GAGCGTCGGGTCCGCGCCGGCAACAAGTATTTCAGCCCGATCCGGCTGCAGCTCTCCTTCCGCTCCACCCTCGACGTGCT TTCCGCAGTCGACACGGTCTTTGCCAACCCGGGCAATGCCAAAGGCCTGAGCGCCAGGAACGAGGCAATCGTCCATGCCT CGAACCGCATCGGCCACCCCGGAGCGGTCGACATCTGGGACATCATCGCGCCCGAGCCGACCACCTCCGAAGACGACTGG ACGGCACCCTTCGACGCGACGCCCGAGCGGGCCCCGGTCAACATTCTCGCCCGGCGGATCGCGGCCGTGCTCGAAGACTG GATCGGCAAGGAGACCGTGATCGAGAAGGGCGTCCGGCGGCCGATGCGGCCCGGCGACGTCATCGTGCTGGTGCGCAAGC GCGATGCCTTCGTCAACGCGCTGACGCGGGCGCTGAAGCGCCGCGGCAACATTCCAGTCGCCGGTGCCGACAGGCTGGTA CTGACCAACCACATCGCCATCCAGGATCTCCTGGCGCTCGGCCGCTTCGTGCTCCTGCCCGAAGATGACCTGTCGCTCGC CGCACTGCTGAAAAGCCCGCTCGTCAATCTCGGCGAGGACGACGTCTTCGACCTGGCGGCGCGGCGGGCGGAGGGCGAAA GCCTCTGGCAGCGGCTGCAGCAGCTCGGTGCGGAGGAAAAAAGCCGATATTGCCGCGTCGTGCGGATCCTCGCCGGCTAT GGCGAACTTGCCCGCGATCTGCTGCCGCACGACTTCTACGCCCGGGTGCTCGGCGCCCATGGCGGCCGACGTGCCTTCCT GGCGCGGCTCGGCAGCGAGGTCAGCGACATTCTCGACGAATTCCTCACCTTCGCGCTCGACCACGAGCGGAGCGGCCTGC CCGGCCTGCAGGCCTTCATCTCGACGCTCGAGATCGAAGCGCCGACCGTCAAGCGCGAGCAGGACAAGGAACGCGACGAG GTGCGCGTCATGACCGTGCACGCCGCCAAGGGGCTCGAGGCACCGGTGGTCTTCCTGGTCGACGGCGGCGGCGAGGCATT CGTACGCCAGCAGGTCTCGGACCTGCGCCTCCTGGAGAAGCCGCAGGCCGGCGGCGCTCCGGTCATCGTGCCGGTCTGGC GGGCGCCCGGCTCGGCGTCCAATTCGCTGATCGCCGCCGACAACGAGCGGCTGAAGCGGCTGGCGGAGGAAGAGTATCGC CGCCTCCTCTATGTCGGCATGACACGGGCGGCGGATCGGCTGATCGTCTGCGGTTATCGCGGCCAGCGGCAGAACCTCGA TACCTGGCATGCCATGGTCCAGGGGACGCTGGCGCACGATCCGAAAGGCAGGGCGGTGCCGACGGACTTTTCAGCCGGCG GCGAAGAATGGACGGGCCATGCCTGGCGTGAAGCGCCTGTGCCGGTAACCATCCCGGAGAGTGGCGACGCAAAGAGCAAG CCGGACGCGGCTGCGTCGATCCTGCCGCCGGCGCTCTTCACGCCCTTGCCGCCGCCGCGCCGCCTGCCGCGGCCGCTCGC CCCTTCTGGTACCAGCGTCGCCATCGACGATCCGGACCGGGAGGCGATCGTCGGCTCGGCGCTCTTTGCCGAGCAGGCCA CGCCCAAATTCTCGATGCTGCGCGGCGCCATCCTGCACCGGCTGCTGCAGGTGCTCCCGACGATCGAGGAGGCTAAGCGC CGGGAGGCGGCGGAACGCTACCTTGGGCGCGCCGTGCCGGGCTGGCCGGAGACGGAGCGGCGGGCGCTGACCGCCGCCGT AATGGATGTGCTCGATCATACGGAACTGCAGCCGCTCTTCGGCGAACAGAGCCGAGCCGAAGTCTCCGTCATGGGAACGC TCAAGCTCGGGAGCCAGGAGTTCGCAATATCCGGCCGCCTCGACCGCCTGGCGATTGCCGGCGACACGGTGACGATCGCC GATTACAAGACCAATCGCGACGTGCCGGCCTCGGTCGACGACGTTCCGTCCGTCTACCGACGGCAGCTCGCCATCTACCG TGATCTGCTGAAGCCGCTCTATCCCGGCAAGCAATTCCGCTCAGTGCTGATCTTCACGGAGGGTCCGGCCGTCCGGGTGC TTCCCGACACGATGCTGGATCGGAGCCTTGAAGAGCTCGCGACAAAGTGA
Upstream 100 bases:
>100_bases GCCTCGCGCCTGATCGTCCAGAAGGAACGGGACTACGGCGGTGAATACGACCACCTGGCACGCGTCGCGGAATGGGCGAC GGCCGACGGGGAGGACGACG
Downstream 100 bases:
>100_bases GATACACGATATTGAAAATCCGGTGGCGAGGCCTCACATGAGGCACAACATCTGGACAATGCCATTCCGAAGGAGCAGCC GATGGCAACTGTAAAAGTCG
Product: DNA helicase (double-strand break repair), AddA type
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1189_residues MRNDTFGTEERTPKAWLDWTTERQSLASDPARSAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAILCLTYTKAAASEMSN RIFERLAEWATLDDAALEKRIETIEGKRPPLAKIHEARRLFAKALETPGGLKIQTIHAFSEALLHQFPLEANVAGHFSVL DDRAAAVLLADARRALLSATAAEGETELAEAFATVLDLADDTGLEKLLQAIVANRAPIQAFLDHASAQSGRERQLRAALG LAPTESAESVMAGAWPLAGLNGAALEQYIGLALSLGGAKPVEIAEGLKAACKVKDAEERFASLLSVFFNGGGKPKAESAF FNKAMLAQAPHLAPLIDEARQHIVSTADRLSIVRMYEATRAALILAERLNGDYEDLKKRRSQLDFEDLINRTAALLSRSD VGAWVHYKLDQGIDHILVDEAQDTSPAQWTIIQALAADFFAGETARADDRTIFAVGDEKQSIYSFQGARPERFSRESVLT ERRVRAGNKYFSPIRLQLSFRSTLDVLSAVDTVFANPGNAKGLSARNEAIVHASNRIGHPGAVDIWDIIAPEPTTSEDDW TAPFDATPERAPVNILARRIAAVLEDWIGKETVIEKGVRRPMRPGDVIVLVRKRDAFVNALTRALKRRGNIPVAGADRLV LTNHIAIQDLLALGRFVLLPEDDLSLAALLKSPLVNLGEDDVFDLAARRAEGESLWQRLQQLGAEEKSRYCRVVRILAGY GELARDLLPHDFYARVLGAHGGRRAFLARLGSEVSDILDEFLTFALDHERSGLPGLQAFISTLEIEAPTVKREQDKERDE VRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRLLEKPQAGGAPVIVPVWRAPGSASNSLIAADNERLKRLAEEEYR RLLYVGMTRAADRLIVCGYRGQRQNLDTWHAMVQGTLAHDPKGRAVPTDFSAGGEEWTGHAWREAPVPVTIPESGDAKSK PDAAASILPPALFTPLPPPRRLPRPLAPSGTSVAIDDPDREAIVGSALFAEQATPKFSMLRGAILHRLLQVLPTIEEAKR REAAERYLGRAVPGWPETERRALTAAVMDVLDHTELQPLFGEQSRAEVSVMGTLKLGSQEFAISGRLDRLAIAGDTVTIA DYKTNRDVPASVDDVPSVYRRQLAIYRDLLKPLYPGKQFRSVLIFTEGPAVRVLPDTMLDRSLEELATK
Sequences:
NA
Specific function: NA
COG id: COG1074
COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA