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The map label for this gene is yhjB [H]

Identifier: 227816422

GI number: 227816422

Start: 3511855

End: 3513327

Strand: Reverse

Name: yhjB [H]

Synonym: BAMEG_3879

Alternate gene names: 227816422

Gene position: 3513327-3511855 (Counterclockwise)

Preceding gene: 227816423

Following gene: 227816421

Centisome position: 67.17

GC content: 37.41

Gene sequence:

>1473_bases
ATGACCGCATTACTTATCATTATTTTATTTTTGTTTCTCGCACTATTTTTGGGAATTCGGGCGCAACATGGAAAAGATAT
GAATTTAGAGCAATGGTCAGTTGGAGGAAGAGGCTTTGGTACTATTTTTGTTTTTCTTCTTATGGCAGGTGAAATTTATA
CGACATTCACATTTTTAGGTGGAAGTGGATGGGCGTATAGTAAAGGAGCACCTACTTTTTATATTTTAGGTTATGGTGCG
TTAGCTTATATTTTATCTTATTTTTTATTACCACCAGTTTGGAAGTATGCAAAAGAGCATAATCTAGTTTCACAGCCAGA
TTTTTTTGTGAAGAAATATAAGAGTCAGGCACTTGGCCTTATCGTTTCTATCATTGGGGTTATTTCGATTATCCCATACC
TTGTTTTACAGTTAAAAGGATTAGGAATTATCGTTTCGGAAGCGTCTTACGGAAGGGTATCACCAGTTATCGCAGTGTGG
ATTGGCGCAATTGTTATAACGATATATGTAATGGTTTCAGGTATACACGGCTCTGCTTGGACGGCCGCTTTGAAGGATAT
TATGATCCTGTTTATCGTTATGTTTTTAGGTATATATTTACCGTACCATTATTACGGAGGATTTCAGCCGATGTTTGAAG
CTGTAGAAGCAGCAAAACCAGGATTTTTATCTTTACCTGATGAAGGAATGAGCATTTCTTGGTTTGTTTCTACTATTATA
TTAACAGCTCTCGGTTTCTATATGTGGCCCCATACATTTGCCTCTGCTTTCTCTGCAAAAAATGAAAAAGTATTTCGTAA
AAATGCGGCCATTATGCCACTGTACTCTTTAGTTTTACTTTTCGTGTTCTTTGCAGGGTTCGCAGCTATTTTGCAAGTTC
CTGGATTAAAGGGAGGGGATGTAGACCTTTCGTTATTCCGTCTGGCTCTTCAAACTTTTGATCCTTGGTTTATTGGGATT
ATTGGTAGTGCTGGAGTTTTAACGGCATTAGTTCCAGGTTCTATGCTTGTCATGGCCGCTTCTACATTATTAGCGAAAAA
TATTTACCGAACAATGGTCCCATCTGCCTCGGATCGACAAGTGGCAAAAGTAGCGAAATTATTTGTTCCTGTAGTAACGC
TTGTAGCTGTTTTATTTACTTTTAAAGGTGGAGAAACGATAGGAGCACTTCTTTTAATGGGATATAGTATAGTGACACAA
CTTTTCCCGGCACTTGTATGTAGTTTGTTTCCACGTCAGACTATTACGAAGCAAGGAGCAATTGCCGGGATGGGGATTGG
GTTATTAGTGGTTGCGTATATTACTTTATCTGGTTCAACTATAGCTACGATGTTTCCGGGTTTCCCTCAATATATAAAAG
ATTTAAATGTAGGTATAGTCGCGCTGTTAATGAATATGATTGTGATGTTTATCGTTAGCGGATTCACCAAAAATGTATCT
ATAAAGAAAGACAATATAATAGTAGAAAAGTAA

Upstream 100 bases:

>100_bases
TGCCATTTTTATTATTTTGGATATTATTATCAGTGCTTATTACATCTCTTTGTATGGGGATTGTATACGTATTTGATCCT
GCTAATAAGGGGGATGTAAA

Downstream 100 bases:

>100_bases
TTCGTATGCTAGAGCTATCTTTGAAAAGAGATAGCTCTTTTTTTGTATATATTTTCTTCTATTAGCGGAATCTAACTAAA
AACTTGTTGAAAAGGAAGTT

Product: sodium/solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTALLIIILFLFLALFLGIRAQHGKDMNLEQWSVGGRGFGTIFVFLLMAGEIYTTFTFLGGSGWAYSKGAPTFYILGYGA
LAYILSYFLLPPVWKYAKEHNLVSQPDFFVKKYKSQALGLIVSIIGVISIIPYLVLQLKGLGIIVSEASYGRVSPVIAVW
IGAIVITIYVMVSGIHGSAWTAALKDIMILFIVMFLGIYLPYHYYGGFQPMFEAVEAAKPGFLSLPDEGMSISWFVSTII
LTALGFYMWPHTFASAFSAKNEKVFRKNAAIMPLYSLVLLFVFFAGFAAILQVPGLKGGDVDLSLFRLALQTFDPWFIGI
IGSAGVLTALVPGSMLVMAASTLLAKNIYRTMVPSASDRQVAKVAKLFVPVVTLVAVLFTFKGGETIGALLLMGYSIVTQ
LFPALVCSLFPRQTITKQGAIAGMGIGLLVVAYITLSGSTIATMFPGFPQYIKDLNVGIVALLMNMIVMFIVSGFTKNVS
IKKDNIIVEK

Sequences:

>Translated_490_residues
MTALLIIILFLFLALFLGIRAQHGKDMNLEQWSVGGRGFGTIFVFLLMAGEIYTTFTFLGGSGWAYSKGAPTFYILGYGA
LAYILSYFLLPPVWKYAKEHNLVSQPDFFVKKYKSQALGLIVSIIGVISIIPYLVLQLKGLGIIVSEASYGRVSPVIAVW
IGAIVITIYVMVSGIHGSAWTAALKDIMILFIVMFLGIYLPYHYYGGFQPMFEAVEAAKPGFLSLPDEGMSISWFVSTII
LTALGFYMWPHTFASAFSAKNEKVFRKNAAIMPLYSLVLLFVFFAGFAAILQVPGLKGGDVDLSLFRLALQTFDPWFIGI
IGSAGVLTALVPGSMLVMAASTLLAKNIYRTMVPSASDRQVAKVAKLFVPVVTLVAVLFTFKGGETIGALLLMGYSIVTQ
LFPALVCSLFPRQTITKQGAIAGMGIGLLVVAYITLSGSTIATMFPGFPQYIKDLNVGIVALLMNMIVMFIVSGFTKNVS
IKKDNIIVEK
>Mature_489_residues
TALLIIILFLFLALFLGIRAQHGKDMNLEQWSVGGRGFGTIFVFLLMAGEIYTTFTFLGGSGWAYSKGAPTFYILGYGAL
AYILSYFLLPPVWKYAKEHNLVSQPDFFVKKYKSQALGLIVSIIGVISIIPYLVLQLKGLGIIVSEASYGRVSPVIAVWI
GAIVITIYVMVSGIHGSAWTAALKDIMILFIVMFLGIYLPYHYYGGFQPMFEAVEAAKPGFLSLPDEGMSISWFVSTIIL
TALGFYMWPHTFASAFSAKNEKVFRKNAAIMPLYSLVLLFVFFAGFAAILQVPGLKGGDVDLSLFRLALQTFDPWFIGII
GSAGVLTALVPGSMLVMAASTLLAKNIYRTMVPSASDRQVAKVAKLFVPVVTLVAVLFTFKGGETIGALLLMGYSIVTQL
FPALVCSLFPRQTITKQGAIAGMGIGLLVVAYITLSGSTIATMFPGFPQYIKDLNVGIVALLMNMIVMFIVSGFTKNVSI
KKDNIIVEK

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 53313; Mature: 53181

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCEEECC
>Mature Secondary Structure 
TALLIIILFLFLALFLGIRAQHGKDMNLEQWSVGGRGFGTIFVFLLMAGEIYTTFTFLG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEC
GSGWAYSKGAPTFYILGYGALAYILSYFLLPPVWKYAKEHNLVSQPDFFVKKYKSQALGL
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IVSIIGVISIIPYLVLQLKGLGIIVSEASYGRVSPVIAVWIGAIVITIYVMVSGIHGSAW
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TAALKDIMILFIVMFLGIYLPYHYYGGFQPMFEAVEAAKPGFLSLPDEGMSISWFVSTII
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH
LTALGFYMWPHTFASAFSAKNEKVFRKNAAIMPLYSLVLLFVFFAGFAAILQVPGLKGGD
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VDLSLFRLALQTFDPWFIGIIGSAGVLTALVPGSMLVMAASTLLAKNIYRTMVPSASDRQ
CHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VAKVAKLFVPVVTLVAVLFTFKGGETIGALLLMGYSIVTQLFPALVCSLFPRQTITKQGA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
IAGMGIGLLVVAYITLSGSTIATMFPGFPQYIKDLNVGIVALLMNMIVMFIVSGFTKNVS
HHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCE
IKKDNIIVEK
EECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]