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The map label for this gene is gerLA [H]

Identifier: 227816421

GI number: 227816421

Start: 3510274

End: 3511752

Strand: Reverse

Name: gerLA [H]

Synonym: BAMEG_3878

Alternate gene names: 227816421

Gene position: 3511752-3510274 (Counterclockwise)

Preceding gene: 227816422

Following gene: 227816420

Centisome position: 67.14

GC content: 36.78

Gene sequence:

>1479_bases
GTGGGGGATTTGTTAGAGCTAAAAGGTAACTTATTTGAAGTTATGAAAAAAATTAGAGATGAGTTAGGTTCGCCTAATGA
TTTGACAATTAGGGAAGTTGCCCTTGCTGGTAGTTTTACACGTTGTGCTGTTGTCTTTTTATGTGGGTTAACAGATAAGG
ATAACGTTTATAAATATGTAGTTCGTACGCTTCAATATGAAGAGATACAAAAAGACGAAGCTGTTGTTCAAACATTATTA
GATCGCTTTATTTCTATTGCAGAAGTTGGTAAGAAGACAACATTTCCGGACATTATAAATGCGATTTTAGCGGGAGATAC
AGTTATATTAATTGATAATATTCAAACTGCTATCGTGATTAATAGTAGAGCTTGGGAAAAAAGAAGTTTAGAATCGCCAG
TAACAGAAGATTTAATACGTGGACCGAGGATAGGATTAAATGAAGATATTAACGTGAATAAAATGTTAATTCGCCGTAGT
TTACGTGACCCAAAGCTGAGATTTCAATCTTATATTATGGGAAAGAGATCCCAAAAAGAAGTGACTTTAGTATATATAGA
AGACATCATTAATCCTTACATTGTAAAAGAGCTAGATCGGCGTCTTCAATCCATAGTGACAGATGTCGTTTTTGAGACGG
GTACAATTGAGCAATTAATTCAAGATAATAATTTGTCACCGTTTCCGCAGTTTTTGAATACGGAAAGGCCAGATAATATT
GTGGCCTCATTAGCGAAAGGAAAGGCAGCTATTTTGGTGGATGGATCACCGTTTGCCCTTATAGCTCCGCTAGTATTTGT
TGATATTTTTCAATCTGTGGAAGATCACTATGAGCGTTGGGTAATAGGGACTTTATTAAGAATTTTGCGGATGGGTTCTG
GTATAGTTGCAATTTTAATGCCGGCGATGTATGTAGCGCTCGTCTCATATCACCAAGGACTTATTCCTTCTAAATTGGCT
TATTCGATTGCTGGAGCAAGAGAAGGTGTTCCTTTTCCTGCCTATATTGAAACGTTAATGATGGCATTAACGATGGAGTT
AATACGAGAAGCAGGAATTAGGTTGCCGAAACCGATGGGACAAACAATTGGGATTGTAGGTGGTCTTGTAATTGGAGAAG
CAGCGGTGAATGCAGGAATTGTAAATCCATTTTTAGTTATCATTATTGCGGTTACAGCTATTGCTACATTTTCACTTCCA
GTGTATAGCATCACAATTACGTTTCGGATTTTACTTTTCGTCTTTGTATTAGCAGCAACGGCTTTTGGATTGTATGGAAT
CATTCTAGCTCTTATTGCGCTTGCTGTTCATATTACAAATTTAACAAGTGTTGGTGTACCGTATACAACTCCAATTGCTC
CTGCATTTTATAAAGATTGGAAAGAAGAGTTTATTCGCATGCCAAAATCAATGTTGAAAGAGAGACCGGAATATTTACAA
ACGAAAGATTCTACAGTACGTCCAAAGGAGCGAGAATAA

Upstream 100 bases:

>100_bases
CGTATGCTAGAGCTATCTTTGAAAAGAGATAGCTCTTTTTTTGTATATATTTTCTTCTATTAGCGGAATCTAACTAAAAA
CTTGTTGAAAAGGAAGTTAG

Downstream 100 bases:

>100_bases
TTGAAACCATTTGAGTATGGCGATGAAGAAATTGGATCTCGGGAAATTGGGTTTGCGGTATCATCGACCATTATTGGTAT
AGGCGCATTATCTATGCCAA

Product: spore germination protein GerLA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MGDLLELKGNLFEVMKKIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLL
DRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLESPVTEDLIRGPRIGLNEDINVNKMLIRRS
LRDPKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNI
VASLAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLA
YSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLP
VYSITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQ
TKDSTVRPKERE

Sequences:

>Translated_492_residues
MGDLLELKGNLFEVMKKIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLL
DRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLESPVTEDLIRGPRIGLNEDINVNKMLIRRS
LRDPKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNI
VASLAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLA
YSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLP
VYSITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQ
TKDSTVRPKERE
>Mature_491_residues
GDLLELKGNLFEVMKKIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYVVRTLQYEEIQKDEAVVQTLLD
RFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVINSRAWEKRSLESPVTEDLIRGPRIGLNEDINVNKMLIRRSL
RDPKLRFQSYIMGKRSQKEVTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNIV
ASLAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILMPAMYVALVSYHQGLIPSKLAY
SIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMGQTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPV
YSITITFRILLFVFVLAATAFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQT
KDSTVRPKERE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 54851; Mature: 54720

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLLELKGNLFEVMKKIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYV
CCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH
VRTLQYEEIQKDEAVVQTLLDRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEE
NSRAWEKRSLESPVTEDLIRGPRIGLNEDINVNKMLIRRSLRDPKLRFQSYIMGKRSQKE
CCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
VTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNI
EEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHH
VASLAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILM
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
PAMYVALVSYHQGLIPSKLAYSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMG
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYSITITFRILLFVFVLAAT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHC
TKDSTVRPKERE
CCCCCCCCCCCC
>Mature Secondary Structure 
GDLLELKGNLFEVMKKIRDELGSPNDLTIREVALAGSFTRCAVVFLCGLTDKDNVYKYV
CCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH
VRTLQYEEIQKDEAVVQTLLDRFISIAEVGKKTTFPDIINAILAGDTVILIDNIQTAIVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEE
NSRAWEKRSLESPVTEDLIRGPRIGLNEDINVNKMLIRRSLRDPKLRFQSYIMGKRSQKE
CCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
VTLVYIEDIINPYIVKELDRRLQSIVTDVVFETGTIEQLIQDNNLSPFPQFLNTERPDNI
EEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCHHH
VASLAKGKAAILVDGSPFALIAPLVFVDIFQSVEDHYERWVIGTLLRILRMGSGIVAILM
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
PAMYVALVSYHQGLIPSKLAYSIAGAREGVPFPAYIETLMMALTMELIREAGIRLPKPMG
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QTIGIVGGLVIGEAAVNAGIVNPFLVIIIAVTAIATFSLPVYSITITFRILLFVFVLAAT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLYGIILALIALAVHITNLTSVGVPYTTPIAPAFYKDWKEEFIRMPKSMLKERPEYLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHC
TKDSTVRPKERE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]