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The map label for this gene is ydbS [H]

Identifier: 227816083

GI number: 227816083

Start: 3192266

End: 3192742

Strand: Reverse

Name: ydbS [H]

Synonym: BAMEG_3509

Alternate gene names: 227816083

Gene position: 3192742-3192266 (Counterclockwise)

Preceding gene: 227816084

Following gene: 227816082

Centisome position: 61.05

GC content: 37.74

Gene sequence:

>477_bases
ATGCAGCCGTTAGAAAGGGAGATTCATTCTAATATGCTGAAAGTGTGGCGAATTCACGCTTTAATTGGGGCGGCAGTTAT
ACTAGCAGTCGTAATTGCGTATTTCTTTTTTATGATCAATTTTAATTGGTGGGGATGGCTGTTCGGATTATTAGTAACAG
CCGCTATTACATTTATCCCGCTCAATTATTTTGTATTTCCAAATTTACGTCAACGCTATTATAGTTACAGATTAAATGAA
GAAGAGATTGAGATTCAAAAGGGAATGTTCGTTGTAAAACGAGTGCTCATTCCGATGATTCGCGTGCAGCACGTAACGAT
TGAACAAGGACCGATTATGAGAAAGTATAATTTAGCAGAATTACATATTTCAACAGCAGCAACTTCTCATAGTATTCCAG
GCTTAACGAAAGAAGAAGCAGAGCAGCTGAAAAGACAAATTGGAGAACTTGCGAAAGTGAGTGATGAGGATGTATAA

Upstream 100 bases:

>100_bases
TTTAAAGAAGTAATGGACACGATGTAAAAACTATAATTTTACAAAAATGTATATACCAACTAATATATAAGTAATAAATT
CATATAATTGGAGTGATGAA

Downstream 100 bases:

>100_bases
GAGGCAGCATCCGATCACGATATTATTAGGTATTCGAATTGCGGGTTTATTGCCTTTTATTTTTCTTGTTTTATTTCGAT
CAGATGGTCAAGTAGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQPLEREIHSNMLKVWRIHALIGAAVILAVVIAYFFFMINFNWWGWLFGLLVTAAITFIPLNYFVFPNLRQRYYSYRLNE
EEIEIQKGMFVVKRVLIPMIRVQHVTIEQGPIMRKYNLAELHISTAATSHSIPGLTKEEAEQLKRQIGELAKVSDEDV

Sequences:

>Translated_158_residues
MQPLEREIHSNMLKVWRIHALIGAAVILAVVIAYFFFMINFNWWGWLFGLLVTAAITFIPLNYFVFPNLRQRYYSYRLNE
EEIEIQKGMFVVKRVLIPMIRVQHVTIEQGPIMRKYNLAELHISTAATSHSIPGLTKEEAEQLKRQIGELAKVSDEDV
>Mature_158_residues
MQPLEREIHSNMLKVWRIHALIGAAVILAVVIAYFFFMINFNWWGWLFGLLVTAAITFIPLNYFVFPNLRQRYYSYRLNE
EEIEIQKGMFVVKRVLIPMIRVQHVTIEQGPIMRKYNLAELHISTAATSHSIPGLTKEEAEQLKRQIGELAKVSDEDV

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 18434; Mature: 18434

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLEREIHSNMLKVWRIHALIGAAVILAVVIAYFFFMINFNWWGWLFGLLVTAAITFIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LNYFVFPNLRQRYYSYRLNEEEIEIQKGMFVVKRVLIPMIRVQHVTIEQGPIMRKYNLAE
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHCCHHH
LHISTAATSHSIPGLTKEEAEQLKRQIGELAKVSDEDV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQPLEREIHSNMLKVWRIHALIGAAVILAVVIAYFFFMINFNWWGWLFGLLVTAAITFIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LNYFVFPNLRQRYYSYRLNEEEIEIQKGMFVVKRVLIPMIRVQHVTIEQGPIMRKYNLAE
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHCCHHH
LHISTAATSHSIPGLTKEEAEQLKRQIGELAKVSDEDV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]