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The map label for this gene is ydbT [H]

Identifier: 227816082

GI number: 227816082

Start: 3190855

End: 3192216

Strand: Reverse

Name: ydbT [H]

Synonym: BAMEG_3508

Alternate gene names: 227816082

Gene position: 3192216-3190855 (Counterclockwise)

Preceding gene: 227816083

Following gene: 227816080

Centisome position: 61.04

GC content: 38.33

Gene sequence:

>1362_bases
TTGCCTTTTATTTTTCTTGTTTTATTTCGATCAGATGGTCAAGTAGAACCGTGGTATTTTTTCCACCTTATTCTTTTGGC
TCTATTATTCATTATGGCTATTTTCTCAGCTATAAAATGGTATTTCAAAGTGTACTGGGATGAAAATAATATTTTACATA
TAAAACACGGCGTTTTCGTTAAGAAAGAAAGTTACTTAAATAAAGAACGTGTGCAAAATATTAGTACGTCTTCTAACATC
ATTTATCAAGTGCTTGGACTGACGAAATTAAATATTGAAGTAGCAGGCGGCGGTACTGAGCCAGAAGTGATGTTGGCGGG
TATTAGAGAAGAAGAAGCGAAGGAACTCATTGCATTATTACATAAAGAAAAAAGCACTGTGAGTGAAGAAGCGCCTGCGG
AAGAAGGAAGTAAGACGGTTTATCAGCTAACAACGAAAGAAATTTTAGCAGCATCTATTACATCTGGCAGATTTGGGTTA
GTGTTTTCTATGTTAGTCATCCTTTACACAGAGTTTAATCAATTTTTACCAGAATGGCTCATCAATAAAGTAGAAGCGTA
TGTGATGGATAACGGTGTATATGAATTAATCGTTATGGCGGCGATTTTAATGGCAGTGTCGTGGGTCATTTCAACAGCTG
GCTATGCGTTAAAATATGCGAACTTTAAAATAGAGCGAAACGGAAATGAAGTTCGCATCGTGCAAGGATTATTTGATAAG
AAAGAGTTTGTGTTAAAATTACATCGCATTCAAGCGATTACGGTGAAAGAGGGAATTCTCCGCCAGCCTTTCGGTTATTG
CTCTGTCGAGGTGGAAGTCATTCAAAGTATAGAAGCGGCAGGAAATGAAGTGACGCTACATCCTTTTATGAAGAAAAAAG
ATGTGCAGCAGTTACTTGCATATTTACAGTTGCCGTATGAAATGGAAGAGAAAATCGTTCCTTTACCGAGGGATGCATTA
CGTCGCTACGTCATAATGGGCTGGGTTACAAGTGCTGTGCTTGCTGTGCCAATCATCGGTGCGAGTATATATTTTAAACA
AAATATCGCGTTGTTCATTTTGATACCACTATTTATTATATTTACGTTACTTGCATACGCTCGGTATACAAGTAGTGGTT
ATATGATACGAGACAATCAGTTAGTCATGGTGTACCGAGGACTCGCGAAATATACAGGAATCATGCGAAGAAGGCATGTT
CAAGCAGTCGGATACAGTCAGTCGTATTTCCAAAAGAAAGACGAGCTATGTACAGCTAACGTGTCAGTAGCGGGGCATCG
TTACAAAGTGAAGCATATGCAAAAAGAAGATGCGCTTCGTATATATAATTGGTACAAAGAAAAAGGAAACACCGGCGTGT
AA

Upstream 100 bases:

>100_bases
CTGAAAAGACAAATTGGAGAACTTGCGAAAGTGAGTGATGAGGATGTATAAGAGGCAGCATCCGATCACGATATTATTAG
GTATTCGAATTGCGGGTTTA

Downstream 100 bases:

>100_bases
CGGTGTTTCCTTTTTTGTGTGTCATGATTCGTCGAATCGTCGATATATTTCAAAAATCGTTGATATATTTAAAGATACGA
TAGATATATTCGAAAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MPFIFLVLFRSDGQVEPWYFFHLILLALLFIMAIFSAIKWYFKVYWDENNILHIKHGVFVKKESYLNKERVQNISTSSNI
IYQVLGLTKLNIEVAGGGTEPEVMLAGIREEEAKELIALLHKEKSTVSEEAPAEEGSKTVYQLTTKEILAASITSGRFGL
VFSMLVILYTEFNQFLPEWLINKVEAYVMDNGVYELIVMAAILMAVSWVISTAGYALKYANFKIERNGNEVRIVQGLFDK
KEFVLKLHRIQAITVKEGILRQPFGYCSVEVEVIQSIEAAGNEVTLHPFMKKKDVQQLLAYLQLPYEMEEKIVPLPRDAL
RRYVIMGWVTSAVLAVPIIGASIYFKQNIALFILIPLFIIFTLLAYARYTSSGYMIRDNQLVMVYRGLAKYTGIMRRRHV
QAVGYSQSYFQKKDELCTANVSVAGHRYKVKHMQKEDALRIYNWYKEKGNTGV

Sequences:

>Translated_453_residues
MPFIFLVLFRSDGQVEPWYFFHLILLALLFIMAIFSAIKWYFKVYWDENNILHIKHGVFVKKESYLNKERVQNISTSSNI
IYQVLGLTKLNIEVAGGGTEPEVMLAGIREEEAKELIALLHKEKSTVSEEAPAEEGSKTVYQLTTKEILAASITSGRFGL
VFSMLVILYTEFNQFLPEWLINKVEAYVMDNGVYELIVMAAILMAVSWVISTAGYALKYANFKIERNGNEVRIVQGLFDK
KEFVLKLHRIQAITVKEGILRQPFGYCSVEVEVIQSIEAAGNEVTLHPFMKKKDVQQLLAYLQLPYEMEEKIVPLPRDAL
RRYVIMGWVTSAVLAVPIIGASIYFKQNIALFILIPLFIIFTLLAYARYTSSGYMIRDNQLVMVYRGLAKYTGIMRRRHV
QAVGYSQSYFQKKDELCTANVSVAGHRYKVKHMQKEDALRIYNWYKEKGNTGV
>Mature_452_residues
PFIFLVLFRSDGQVEPWYFFHLILLALLFIMAIFSAIKWYFKVYWDENNILHIKHGVFVKKESYLNKERVQNISTSSNII
YQVLGLTKLNIEVAGGGTEPEVMLAGIREEEAKELIALLHKEKSTVSEEAPAEEGSKTVYQLTTKEILAASITSGRFGLV
FSMLVILYTEFNQFLPEWLINKVEAYVMDNGVYELIVMAAILMAVSWVISTAGYALKYANFKIERNGNEVRIVQGLFDKK
EFVLKLHRIQAITVKEGILRQPFGYCSVEVEVIQSIEAAGNEVTLHPFMKKKDVQQLLAYLQLPYEMEEKIVPLPRDALR
RYVIMGWVTSAVLAVPIIGASIYFKQNIALFILIPLFIIFTLLAYARYTSSGYMIRDNQLVMVYRGLAKYTGIMRRRHVQ
AVGYSQSYFQKKDELCTANVSVAGHRYKVKHMQKEDALRIYNWYKEKGNTGV

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 52009; Mature: 51878

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIFLVLFRSDGQVEPWYFFHLILLALLFIMAIFSAIKWYFKVYWDENNILHIKHGVFV
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCEEE
KKESYLNKERVQNISTSSNIIYQVLGLTKLNIEVAGGGTEPEVMLAGIREEEAKELIALL
EHHHHCCHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHH
HKEKSTVSEEAPAEEGSKTVYQLTTKEILAASITSGRFGLVFSMLVILYTEFNQFLPEWL
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
INKVEAYVMDNGVYELIVMAAILMAVSWVISTAGYALKYANFKIERNGNEVRIVQGLFDK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEHHHCH
KEFVLKLHRIQAITVKEGILRQPFGYCSVEVEVIQSIEAAGNEVTLHPFMKKKDVQQLLA
HHHHHHHHHHEEEEHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
YLQLPYEMEEKIVPLPRDALRRYVIMGWVTSAVLAVPIIGASIYFKQNIALFILIPLFII
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
FTLLAYARYTSSGYMIRDNQLVMVYRGLAKYTGIMRRRHVQAVGYSQSYFQKKDELCTAN
HHHHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEC
VSVAGHRYKVKHMQKEDALRIYNWYKEKGNTGV
EEECCCEEEEHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PFIFLVLFRSDGQVEPWYFFHLILLALLFIMAIFSAIKWYFKVYWDENNILHIKHGVFV
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCEEE
KKESYLNKERVQNISTSSNIIYQVLGLTKLNIEVAGGGTEPEVMLAGIREEEAKELIALL
EHHHHCCHHHHHCCCCCHHHHHHHHCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHH
HKEKSTVSEEAPAEEGSKTVYQLTTKEILAASITSGRFGLVFSMLVILYTEFNQFLPEWL
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
INKVEAYVMDNGVYELIVMAAILMAVSWVISTAGYALKYANFKIERNGNEVRIVQGLFDK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEHHHCH
KEFVLKLHRIQAITVKEGILRQPFGYCSVEVEVIQSIEAAGNEVTLHPFMKKKDVQQLLA
HHHHHHHHHHEEEEHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
YLQLPYEMEEKIVPLPRDALRRYVIMGWVTSAVLAVPIIGASIYFKQNIALFILIPLFII
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
FTLLAYARYTSSGYMIRDNQLVMVYRGLAKYTGIMRRRHVQAVGYSQSYFQKKDELCTAN
HHHHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEC
VSVAGHRYKVKHMQKEDALRIYNWYKEKGNTGV
EEECCCEEEEHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]