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The map label for this gene is leuC

Identifier: 227815750

GI number: 227815750

Start: 2891469

End: 2892863

Strand: Reverse

Name: leuC

Synonym: BAMEG_3173

Alternate gene names: 227815750

Gene position: 2892863-2891469 (Counterclockwise)

Preceding gene: 227815751

Following gene: 227815749

Centisome position: 55.31

GC content: 41.72

Gene sequence:

>1395_bases
ATGGGGAAAAGGTTGCTAGATAAGCTTTGGGAAAGACACGTAGTTACGACCAACGAAAATGGATTGGATTTATTATATAT
CGATCTGCATCTTGTTCATGAAGTAACGTCACCGCAAGCCTTTGAAGGCTTGCGGCTTACAAATCGAACGGTACGCAGAC
CAGATTTAACATTCGCAACGATGGATCATAATATTCCAACGAAAGATGTTTGGAATATTACCGATCGCATTGCGAAGCAG
CAACTAGATACGCTTCGGGAAAATTGTAAACAATTTCAGGTGCCGTTAGCGGATATCGGGGATGAAGAGCAAGGGATCGT
TCATGTTATCGGACCAGAACTTGGGCTCACGCAGCCAGGAAAAACAATTGTTTGTGGTGATAGTCATACAGCAACGCACG
GTGCGTTTGGCGCGCTAGCATTTGGCATTGGTACGAGTGAAGTGGAACATGTATTGGCAACGCAAACGTTGTGGCAAAGA
AAACCGAAAGCGATGGGAATTGAGTTAAAAGGAAAATTACAGAAAGGCGTTTACGCAAAAGATATTATTTTGCATCTCCT
TTCAAAGTACGGTGTAGCAGTTGGAACTGGATACGTAATGGAATTTTACGGAGAGACGATTGGGACCATGGAGATGGAAG
AGAGAATGACGCTTTGTAATATGGCGATTGAAGGAGGAGCAAAAGCGGGTATTATCGCACCAGATGAAAAAACATTTGCT
TATGTAAAAGGACGTAAATATGCACCGAGAGACTATGAAACTTTCGAGAAGAAATGGTTTGAACTGTATACAGATGCAGA
TGCAATTTATGATTTACATATTTCGATAGATGTTACGGATTTAGCGCCGTATGTTACGTGGGGAACGAACCCGAGTATGG
GAGTTCGTATTGATGAGAAATTGCCAGAAAAGCATGATGTAAATGACGAAAGAGCATTCTCTTATATGGGATTAATCCCT
GGACAAAGTACGTATGACATTCCAGTTCAGCATGTCTTCATTGGATCTTGTACAAATTCTAGATTATCTGATTTAGAAAT
TGCTGCATCTGTTGTGAAAGGGAGAAAGGTAAAAGAAGGTGTGCGAGCACTCGTTGTACCTGGATCGAAAAGAGTAAGGG
ATGCGGCGATGCAAAAAGGACTACATCACATATTTGAAGAAGCTGGATTTGAATGGAGAGAACCTGGATGTTCCATGTGT
CTTGGAATGAATCCAGATCAAGTACCTGAAGGAGAGCATTGTGCTTCAACTTCAAATCGTAATTTTGAAGGAAGACAAGG
AAAAGGAGCACGAACGCATTTAGTTAGCCCAGCAATGGCGGCAGCAGCTGCGTTATATGGTCATTTTGTTGATATTAGAA
AGGAGAGTTATGATGGAGCCATTTCGTATTCATAA

Upstream 100 bases:

>100_bases
AATGTACAGCAGATATCGGGGGGACTGAAACGACAACTTCATTTACAAAGGCAGTTATGCAAGAAATGGAAGAACAAGCG
CTAGTAGGGAGAGGAAGATA

Downstream 100 bases:

>100_bases
AGGTACTGCCGCAGTACTAATGAATGATAACATTGATACGGATCAAATTATTCCGAAGCAATATTTAAAGAGAATTGAAA
GAACTGGGTTTGGAAAGTTT

Product: isopropylmalate isomerase large subunit

Products: NA

Alternate protein names: Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MGKRLLDKLWERHVVTTNENGLDLLYIDLHLVHEVTSPQAFEGLRLTNRTVRRPDLTFATMDHNIPTKDVWNITDRIAKQ
QLDTLRENCKQFQVPLADIGDEEQGIVHVIGPELGLTQPGKTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLWQR
KPKAMGIELKGKLQKGVYAKDIILHLLSKYGVAVGTGYVMEFYGETIGTMEMEERMTLCNMAIEGGAKAGIIAPDEKTFA
YVKGRKYAPRDYETFEKKWFELYTDADAIYDLHISIDVTDLAPYVTWGTNPSMGVRIDEKLPEKHDVNDERAFSYMGLIP
GQSTYDIPVQHVFIGSCTNSRLSDLEIAASVVKGRKVKEGVRALVVPGSKRVRDAAMQKGLHHIFEEAGFEWREPGCSMC
LGMNPDQVPEGEHCASTSNRNFEGRQGKGARTHLVSPAMAAAAALYGHFVDIRKESYDGAISYS

Sequences:

>Translated_464_residues
MGKRLLDKLWERHVVTTNENGLDLLYIDLHLVHEVTSPQAFEGLRLTNRTVRRPDLTFATMDHNIPTKDVWNITDRIAKQ
QLDTLRENCKQFQVPLADIGDEEQGIVHVIGPELGLTQPGKTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLWQR
KPKAMGIELKGKLQKGVYAKDIILHLLSKYGVAVGTGYVMEFYGETIGTMEMEERMTLCNMAIEGGAKAGIIAPDEKTFA
YVKGRKYAPRDYETFEKKWFELYTDADAIYDLHISIDVTDLAPYVTWGTNPSMGVRIDEKLPEKHDVNDERAFSYMGLIP
GQSTYDIPVQHVFIGSCTNSRLSDLEIAASVVKGRKVKEGVRALVVPGSKRVRDAAMQKGLHHIFEEAGFEWREPGCSMC
LGMNPDQVPEGEHCASTSNRNFEGRQGKGARTHLVSPAMAAAAALYGHFVDIRKESYDGAISYS
>Mature_463_residues
GKRLLDKLWERHVVTTNENGLDLLYIDLHLVHEVTSPQAFEGLRLTNRTVRRPDLTFATMDHNIPTKDVWNITDRIAKQQ
LDTLRENCKQFQVPLADIGDEEQGIVHVIGPELGLTQPGKTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLWQRK
PKAMGIELKGKLQKGVYAKDIILHLLSKYGVAVGTGYVMEFYGETIGTMEMEERMTLCNMAIEGGAKAGIIAPDEKTFAY
VKGRKYAPRDYETFEKKWFELYTDADAIYDLHISIDVTDLAPYVTWGTNPSMGVRIDEKLPEKHDVNDERAFSYMGLIPG
QSTYDIPVQHVFIGSCTNSRLSDLEIAASVVKGRKVKEGVRALVVPGSKRVRDAAMQKGLHHIFEEAGFEWREPGCSMCL
GMNPDQVPEGEHCASTSNRNFEGRQGKGARTHLVSPAMAAAAALYGHFVDIRKESYDGAISYS

Specific function: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate

COG id: COG0065

COG function: function code E; 3-isopropylmalate dehydratase large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily

Homologues:

Organism=Homo sapiens, GI4501867, Length=355, Percent_Identity=26.4788732394366, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI8659555, Length=386, Percent_Identity=25.9067357512953, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI41352693, Length=377, Percent_Identity=25.9946949602122, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI1786259, Length=465, Percent_Identity=58.7096774193548, Blast_Score=524, Evalue=1e-150,
Organism=Escherichia coli, GI1787531, Length=363, Percent_Identity=27.5482093663912, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI87081781, Length=343, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI2367097, Length=337, Percent_Identity=25.2225519287834, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25149337, Length=359, Percent_Identity=30.9192200557103, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI32564738, Length=359, Percent_Identity=31.7548746518106, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI25149342, Length=305, Percent_Identity=30.4918032786885, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17568399, Length=429, Percent_Identity=26.8065268065268, Blast_Score=102, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321429, Length=472, Percent_Identity=55.9322033898305, Blast_Score=493, Evalue=1e-140,
Organism=Saccharomyces cerevisiae, GI6320440, Length=414, Percent_Identity=28.2608695652174, Blast_Score=150, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6323335, Length=356, Percent_Identity=29.2134831460674, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6322261, Length=404, Percent_Identity=29.2079207920792, Blast_Score=135, Evalue=1e-32,
Organism=Drosophila melanogaster, GI281365315, Length=393, Percent_Identity=27.4809160305344, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI17864292, Length=393, Percent_Identity=27.4809160305344, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI161076999, Length=384, Percent_Identity=27.34375, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28571643, Length=391, Percent_Identity=28.1329923273657, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24645686, Length=380, Percent_Identity=27.6315789473684, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17137564, Length=380, Percent_Identity=25.7894736842105, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: 280 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): LEUC_BACAA (C3P4Z8)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002865914.1
- ProteinModelPortal:   C3P4Z8
- SMR:   C3P4Z8
- EnsemblBacteria:   EBBACT00000124841
- GeneID:   7850347
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_1489
- GeneTree:   EBGT00050000000860
- ProtClustDB:   PRK05478
- HAMAP:   MF_01026
- InterPro:   IPR004430
- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015932
- InterPro:   IPR018136
- InterPro:   IPR015936
- Gene3D:   G3DSA:3.30.499.10
- Gene3D:   G3DSA:3.40.1060.10
- PANTHER:   PTHR11670
- PANTHER:   PTHR11670:SF6
- PRINTS:   PR00415
- TIGRFAMs:   TIGR00170

Pfam domain/function: PF00330 Aconitase; SSF53732 Aconitase_N

EC number: =4.2.1.33

Molecular weight: Translated: 51517; Mature: 51386

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00450 ACONITASE_1; PS01244 ACONITASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRLLDKLWERHVVTTNENGLDLLYIDLHLVHEVTSPQAFEGLRLTNRTVRRPDLTFAT
CCHHHHHHHHHCCEEEECCCCCEEEEEEEEEHHHHCCCHHHCCCCCCCCCCCCCCCEEEE
MDHNIPTKDVWNITDRIAKQQLDTLRENCKQFQVPLADIGDEEQGIVHVIGPELGLTQPG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCC
KTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLWQRKPKAMGIELKGKLQKGVYAK
CEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCHHH
DIILHLLSKYGVAVGTGYVMEFYGETIGTMEMEERMTLCNMAIEGGAKAGIIAPDEKTFA
HHHHHHHHHCCCCCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEE
YVKGRKYAPRDYETFEKKWFELYTDADAIYDLHISIDVTDLAPYVTWGTNPSMGVRIDEK
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHCCCEEEECCCCCCCEEEHHH
LPEKHDVNDERAFSYMGLIPGQSTYDIPVQHVFIGSCTNSRLSDLEIAASVVKGRKVKEG
CCCCCCCCHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHCC
VRALVVPGSKRVRDAAMQKGLHHIFEEAGFEWREPGCSMCLGMNPDQVPEGEHCASTSNR
CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCC
NFEGRQGKGARTHLVSPAMAAAAALYGHFVDIRKESYDGAISYS
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
GKRLLDKLWERHVVTTNENGLDLLYIDLHLVHEVTSPQAFEGLRLTNRTVRRPDLTFAT
CHHHHHHHHHCCEEEECCCCCEEEEEEEEEHHHHCCCHHHCCCCCCCCCCCCCCCEEEE
MDHNIPTKDVWNITDRIAKQQLDTLRENCKQFQVPLADIGDEEQGIVHVIGPELGLTQPG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCC
KTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLWQRKPKAMGIELKGKLQKGVYAK
CEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCHHH
DIILHLLSKYGVAVGTGYVMEFYGETIGTMEMEERMTLCNMAIEGGAKAGIIAPDEKTFA
HHHHHHHHHCCCCCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCEECCCCCEEE
YVKGRKYAPRDYETFEKKWFELYTDADAIYDLHISIDVTDLAPYVTWGTNPSMGVRIDEK
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHCCCEEEECCCCCCCEEEHHH
LPEKHDVNDERAFSYMGLIPGQSTYDIPVQHVFIGSCTNSRLSDLEIAASVVKGRKVKEG
CCCCCCCCHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHCC
VRALVVPGSKRVRDAAMQKGLHHIFEEAGFEWREPGCSMCLGMNPDQVPEGEHCASTSNR
CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCC
NFEGRQGKGARTHLVSPAMAAAAALYGHFVDIRKESYDGAISYS
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA