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The map label for this gene is 227814354

Identifier: 227814354

GI number: 227814354

Start: 1607770

End: 1608807

Strand: Direct

Name: 227814354

Synonym: BAMEG_1762

Alternate gene names: NA

Gene position: 1607770-1608807 (Clockwise)

Preceding gene: 227814353

Following gene: 227814355

Centisome position: 30.74

GC content: 38.73

Gene sequence:

>1038_bases
ATGAGGACACAAAAAGTCTTTACGACGATTGATACACATACGGGTGGGAATCCAACGAGAACATTGATTAGCGGACTACC
TAAGTTACTTGGAGAGACGATGGCAGAGAAAATGTTACATATGAAAAAGGAGTATGACTGGATTCGCAAATTGTTAATGA
ATGAACCGCGTGGTCATGATGTAATGTCCGGAGCACTATTAACAGATCCATGTCACCCTGATGCCGATATTGGTGTTATA
TACATAGAGACAGGCGGATATTTACCAATGTGTGGTCACGATACAATTGGTGTATGTACAGCTTTAATTGAATCAGGTTT
AATTCCGGTAGTTGAACCGATTACTTCGTTAAAGCTAGATACGCCAGCCGGCTTAGTTGAAGTGGATATCTTTGTTCGAG
ATGGAAAAGCGAAAGAAGTCTCCTTTTGTAACATACCAGCTTTTATACTGAAACATATCACGGTAGACGTCGAGAACATT
GGAACTGTAGAGGCTGATATTGCGTATGGAGGGAACTTTTATGCCATTATCGATGCGAAATCAGTAGGGTTAGAGTTAGT
ACCGGAACATGCATCTACAATTATCGATAAGGCAATTCATATTAGAAATATCATTAATGAGAGATTTGAAATCATTCATC
CAGAGTATTCGTTTATTAGAGGATTAACCCATGTGGAGTTTTATACAGATCCTACCCATGAAAGTGCACATGTAAAAAAC
ACAGTTGTCGTTCCGCCTGGAGGAATTGATCGATCTCCATGTGGTACAGGAACATCAGCGAAGTTAGCTGTATTATACGC
AAACCAAAAAATTGAAATGAATGAAGAGTTTGTTCATGAGAGTATTGTTGGTTCTTTATTTAAAGGGTGCGTTATAAATA
CGACAAATGTTGCAAATATGGAAGCTGTCGTAACGAAAATTACAGGTTCAGCTTGGCTTATGGGGATGCATAGATTTTTT
TACAATGAAAAGGATCCACTGAAAGAAGGATTTTTGCTAATTCCGCCGATGGAACATGAAACGGAGGATGTAAAATGA

Upstream 100 bases:

>100_bases
TTACAGGGAAAGTGATTGAAGAGTTATTAAATGAAAAAGAAACAATCATTCCTATTGAACCACTTCGTTTGAGTCGTTTT
ACAGAAAGGGTGTTAAACGG

Downstream 100 bases:

>100_bases
ACATTCAAAAAATGTATACAGCAGTAGACGTACACGTAAATGGCGAGGCATTCCGTGTAATAAAAGATGTACCATGCAAG
TACTACTACAATTTAGAGCA

Product: putative proline racemase

Products: D-proline

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRTQKVFTTIDTHTGGNPTRTLISGLPKLLGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPDADIGVI
YIETGGYLPMCGHDTIGVCTALIESGLIPVVEPITSLKLDTPAGLVEVDIFVRDGKAKEVSFCNIPAFILKHITVDVENI
GTVEADIAYGGNFYAIIDAKSVGLELVPEHASTIIDKAIHIRNIINERFEIIHPEYSFIRGLTHVEFYTDPTHESAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYANQKIEMNEEFVHESIVGSLFKGCVINTTNVANMEAVVTKITGSAWLMGMHRFF
YNEKDPLKEGFLLIPPMEHETEDVK

Sequences:

>Translated_345_residues
MRTQKVFTTIDTHTGGNPTRTLISGLPKLLGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPDADIGVI
YIETGGYLPMCGHDTIGVCTALIESGLIPVVEPITSLKLDTPAGLVEVDIFVRDGKAKEVSFCNIPAFILKHITVDVENI
GTVEADIAYGGNFYAIIDAKSVGLELVPEHASTIIDKAIHIRNIINERFEIIHPEYSFIRGLTHVEFYTDPTHESAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYANQKIEMNEEFVHESIVGSLFKGCVINTTNVANMEAVVTKITGSAWLMGMHRFF
YNEKDPLKEGFLLIPPMEHETEDVK
>Mature_345_residues
MRTQKVFTTIDTHTGGNPTRTLISGLPKLLGETMAEKMLHMKKEYDWIRKLLMNEPRGHDVMSGALLTDPCHPDADIGVI
YIETGGYLPMCGHDTIGVCTALIESGLIPVVEPITSLKLDTPAGLVEVDIFVRDGKAKEVSFCNIPAFILKHITVDVENI
GTVEADIAYGGNFYAIIDAKSVGLELVPEHASTIIDKAIHIRNIINERFEIIHPEYSFIRGLTHVEFYTDPTHESAHVKN
TVVVPPGGIDRSPCGTGTSAKLAVLYANQKIEMNEEFVHESIVGSLFKGCVINTTNVANMEAVVTKITGSAWLMGMHRFF
YNEKDPLKEGFLLIPPMEHETEDVK

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family

Homologues:

Organism=Homo sapiens, GI21389361, Length=337, Percent_Identity=33.2344213649852, Blast_Score=198, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2834_BACAN (Q81PH1)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_845180.1
- RefSeq:   YP_019476.1
- RefSeq:   YP_028902.1
- HSSP:   Q4DA80
- ProteinModelPortal:   Q81PH1
- EnsemblBacteria:   EBBACT00000009166
- EnsemblBacteria:   EBBACT00000017187
- EnsemblBacteria:   EBBACT00000020304
- GeneID:   1085580
- GeneID:   2819227
- GeneID:   2849348
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_2834
- KEGG:   bar:GBAA_2834
- KEGG:   bat:BAS2643
- TIGR:   BA_2834
- TIGR:   GBAA_2834
- GeneTree:   EBGT00050000003463
- HOGENOM:   HBG333420
- OMA:   PTHESAH
- ProtClustDB:   CLSK916823
- BioCyc:   BANT260799:BAS2643-MONOMER
- BioCyc:   BANT261594:GBAA2834-MONOMER
- InterPro:   IPR008794
- PIRSF:   PIRSF029792

Pfam domain/function: PF05544 Pro_racemase

EC number: 5.1.1.4

Molecular weight: Translated: 38055; Mature: 38055

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQKVFTTIDTHTGGNPTRTLISGLPKLLGETMAEKMLHMKKEYDWIRKLLMNEPRGHD
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VMSGALLTDPCHPDADIGVIYIETGGYLPMCGHDTIGVCTALIESGLIPVVEPITSLKLD
HHCCCEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEECC
TPAGLVEVDIFVRDGKAKEVSFCNIPAFILKHITVDVENIGTVEADIAYGGNFYAIIDAK
CCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHEEEHHHCCCEEEEEEECCCEEEEEECC
SVGLELVPEHASTIIDKAIHIRNIINERFEIIHPEYSFIRGLTHVEFYTDPTHESAHVKN
CCCEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCEEEEEEECCCCCCCCCCE
TVVVPPGGIDRSPCGTGTSAKLAVLYANQKIEMNEEFVHESIVGSLFKGCVINTTNVANM
EEEECCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHCCCEEECCCCCHH
EAVVTKITGSAWLMGMHRFFYNEKDPLKEGFLLIPPMEHETEDVK
HHHHHHHCCHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MRTQKVFTTIDTHTGGNPTRTLISGLPKLLGETMAEKMLHMKKEYDWIRKLLMNEPRGHD
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VMSGALLTDPCHPDADIGVIYIETGGYLPMCGHDTIGVCTALIESGLIPVVEPITSLKLD
HHCCCEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHEECC
TPAGLVEVDIFVRDGKAKEVSFCNIPAFILKHITVDVENIGTVEADIAYGGNFYAIIDAK
CCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHEEEHHHCCCEEEEEEECCCEEEEEECC
SVGLELVPEHASTIIDKAIHIRNIINERFEIIHPEYSFIRGLTHVEFYTDPTHESAHVKN
CCCEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCEEEEEEECCCCCCCCCCE
TVVVPPGGIDRSPCGTGTSAKLAVLYANQKIEMNEEFVHESIVGSLFKGCVINTTNVANM
EEEECCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHCCCEEECCCCCHH
EAVVTKITGSAWLMGMHRFFYNEKDPLKEGFLLIPPMEHETEDVK
HHHHHHHCCHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-proline

Specific reaction: L-proline = D-proline

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629