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The map label for this gene is dadA [H]

Identifier: 227814353

GI number: 227814353

Start: 1606598

End: 1607773

Strand: Direct

Name: dadA [H]

Synonym: BAMEG_1761

Alternate gene names: 227814353

Gene position: 1606598-1607773 (Clockwise)

Preceding gene: 227814348

Following gene: 227814354

Centisome position: 30.72

GC content: 39.54

Gene sequence:

>1176_bases
GTGAGGCACTGCGACGTTTTAATAATTGGCGGTGGTATTATTGGCTGCTCGATCGCTTATTACACTTCAAAATACGGAAG
AGACGTAACAATCATTGAAAAAGGAGAATTTGTCAGCGGGACGTCTTCACGCTGTGATGGAAATATTTTGGCTATTGATA
AAGACCCGAGGTTTGATAGTCAAATGTCGTTAGTAAGTCAAAAATTAGTAACGGATTTAAGTGAAGAGTTAGAGCACTCA
TTTGAATATAGGGCGCCAGGAAGTATTCTCGTATGTGAGTCAGACGAAGAAATGGAAGCAGCGCAGCAATGGGTGAATCG
TCAAAAAGAAGCGGGTTTACCGTTTCGAATGCTTGATAGGCAAGATATAAGAGCGGAATCGCCATTCTTTGCAGATGATT
TATTAGGCGGGTTAGAATGCGCAACAGATTCGACTGTAAATCCATATCTTCTTGCTTTTTCACTTCTTGCAGAATCGAAG
AAATATGGTACGAAGGCTTTTAATCATACGGAAGTAAAAGAAATGAAAAGAGATAAAGACGGTTCCTTTATTGTAGAAAC
GACAAATAAGACGTTTACTGCGAAGCAAGTGGTGAACGCAGCGGGTGTGTGGGCTCCGAAAATCGGACAAATGTTGGATG
TAAATATCCCCATTGAACCGAGAAAAGGGCATATTATTGTAGCTTCAAGGCAACAACACGTTGGTTGTCGTAAAGTTATG
GAATTTGGTTATTTAATTTCTAAATTTGGTGGAAAACGAAAAGTGGATGCTTTAACTGAAAAATATGGAGTAGCTCTCGT
ATTTGAGCCGACAGAAAGCCAAAATTTTTTAATTGGTAGTAGTAGAGAGTTTGTAGGGTTTCATACGAAGATAAACAACG
AGGTTATTAAATGTATTGCGAATAGAGCAATTCGTTTTTATCCGAAAATGGCGGATATGATGGTGATTCGTTCATATGCT
GGATTACGCCCGTGGACAGAAGATCATTTGCCGATTATTTCACGTGTGGAACATATCCCGAATTACTTTATTGCAGCAGG
GCATGAAGGGGATGGCATTAGTCTTGCCGCGGTTACAGGGAAAGTGATTGAAGAGTTATTAAATGAAAAAGAAACAATCA
TTCCTATTGAACCACTTCGTTTGAGTCGTTTTACAGAAAGGGTGTTAAACGGATGA

Upstream 100 bases:

>100_bases
TACAAATAAAAATATTGTTTGTAAAAATTGTATATATGTACAGTTGGCACGTCAATTGCATAAAAGAAAGTGAGAGGTTT
AGGGGAAGGAGGAGTATTTT

Downstream 100 bases:

>100_bases
GGACACAAAAAGTCTTTACGACGATTGATACACATACGGGTGGGAATCCAACGAGAACATTGATTAGCGGACTACCTAAG
TTACTTGGAGAGACGATGGC

Product: putative glycine oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRHCDVLIIGGGIIGCSIAYYTSKYGRDVTIIEKGEFVSGTSSRCDGNILAIDKDPRFDSQMSLVSQKLVTDLSEELEHS
FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIRAESPFFADDLLGGLECATDSTVNPYLLAFSLLAESK
KYGTKAFNHTEVKEMKRDKDGSFIVETTNKTFTAKQVVNAAGVWAPKIGQMLDVNIPIEPRKGHIIVASRQQHVGCRKVM
EFGYLISKFGGKRKVDALTEKYGVALVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIANRAIRFYPKMADMMVIRSYA
GLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELLNEKETIIPIEPLRLSRFTERVLNG

Sequences:

>Translated_391_residues
MRHCDVLIIGGGIIGCSIAYYTSKYGRDVTIIEKGEFVSGTSSRCDGNILAIDKDPRFDSQMSLVSQKLVTDLSEELEHS
FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIRAESPFFADDLLGGLECATDSTVNPYLLAFSLLAESK
KYGTKAFNHTEVKEMKRDKDGSFIVETTNKTFTAKQVVNAAGVWAPKIGQMLDVNIPIEPRKGHIIVASRQQHVGCRKVM
EFGYLISKFGGKRKVDALTEKYGVALVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIANRAIRFYPKMADMMVIRSYA
GLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELLNEKETIIPIEPLRLSRFTERVLNG
>Mature_391_residues
MRHCDVLIIGGGIIGCSIAYYTSKYGRDVTIIEKGEFVSGTSSRCDGNILAIDKDPRFDSQMSLVSQKLVTDLSEELEHS
FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIRAESPFFADDLLGGLECATDSTVNPYLLAFSLLAESK
KYGTKAFNHTEVKEMKRDKDGSFIVETTNKTFTAKQVVNAAGVWAPKIGQMLDVNIPIEPRKGHIIVASRQQHVGCRKVM
EFGYLISKFGGKRKVDALTEKYGVALVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIANRAIRFYPKMADMMVIRSYA
GLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELLNEKETIIPIEPLRLSRFTERVLNG

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI24797151, Length=398, Percent_Identity=25.3768844221106, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI197927446, Length=378, Percent_Identity=21.6931216931217, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21361378, Length=378, Percent_Identity=21.6931216931217, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI194306651, Length=209, Percent_Identity=25.8373205741627, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1787438, Length=436, Percent_Identity=21.7889908256881, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788574, Length=315, Percent_Identity=22.2222222222222, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787559, Length=380, Percent_Identity=20.2631578947368, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994045, Length=227, Percent_Identity=25.5506607929515, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71994052, Length=234, Percent_Identity=25.2136752136752, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20130091, Length=390, Percent_Identity=19.7435897435897, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 43768; Mature: 43768

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHCDVLIIGGGIIGCSIAYYTSKYGRDVTIIEKGEFVSGTSSRCDGNILAIDKDPRFDS
CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCH
QMSLVSQKLVTDLSEELEHSFEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEECCC
QDIRAESPFFADDLLGGLECATDSTVNPYLLAFSLLAESKKYGTKAFNHTEVKEMKRDKD
HHCCCCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GSFIVETTNKTFTAKQVVNAAGVWAPKIGQMLDVNIPIEPRKGHIIVASRQQHVGCRKVM
CCEEEEECCCEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHH
EFGYLISKFGGKRKVDALTEKYGVALVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIA
HHHHHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHHH
NRAIRFYPKMADMMVIRSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEHHHH
KVIEELLNEKETIIPIEPLRLSRFTERVLNG
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRHCDVLIIGGGIIGCSIAYYTSKYGRDVTIIEKGEFVSGTSSRCDGNILAIDKDPRFDS
CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCH
QMSLVSQKLVTDLSEELEHSFEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEECCC
QDIRAESPFFADDLLGGLECATDSTVNPYLLAFSLLAESKKYGTKAFNHTEVKEMKRDKD
HHCCCCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
GSFIVETTNKTFTAKQVVNAAGVWAPKIGQMLDVNIPIEPRKGHIIVASRQQHVGCRKVM
CCEEEEECCCEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHH
EFGYLISKFGGKRKVDALTEKYGVALVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIA
HHHHHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHHH
NRAIRFYPKMADMMVIRSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEHHHH
KVIEELLNEKETIIPIEPLRLSRFTERVLNG
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA