| Definition | Bacillus anthracis str. CDC 684, complete genome. |
|---|---|
| Accession | NC_012581 |
| Length | 5,230,115 |
Click here to switch to the map view.
The map label for this gene is hypF [H]
Identifier: 227813906
GI number: 227813906
Start: 1187444
End: 1189774
Strand: Direct
Name: hypF [H]
Synonym: BAMEG_1312
Alternate gene names: 227813906
Gene position: 1187444-1189774 (Clockwise)
Preceding gene: 227813905
Following gene: 227813907
Centisome position: 22.7
GC content: 32.22
Gene sequence:
>2331_bases ATGAAAAAAGTAATAAATATGTTTATAAAAAAGTATCAAGTTAAAGGCATTGTGCAAGGTGTTGGTTTTAGACCTTTCGT ATATAGGATAGCAAAAAAGTATCATCTAAACGGATGGGTGTTAAATGATTCAAATGGAGTGCTTATAGAAGTAGAGGGGG AACAAAATAATATTTCGCATTTTATTCATGATATTGAATTTAATTCCCCAGAATTGGCTTATGTGCAAGAGGTTAAATTG ATAGAGGAACAAGAATCCAACAATCGTTATAGCTCTTTTGATATTTTGAGTAGCCAAAAACATAGTAGTAGGCAAACCTT AATATCTCCTGATACTTATGTATGTAATGAATGTTTAGAAGAATTATTTGATCCAACGAATAGAAGGTTTCGTTATCCAT TTATTAATTGTACAAATTGTGGACCTAGATATTCAATAATAAAAGATATTCCTTATGATAGACCGTATACTACAATGTCC AAATTTCCTATGTGCAAAGAGTGTGATATAGAATACAAAGACATACTTGATCGGAGATTTCATGCACAACCAAATGCTTG CTGGAAATGTGGACCACAAGTTCAATTGAAAACAACAGATGGTACAAATGTCTCCACTGATAATCCAATAGAAAAAACAA TTGATTTGTTGAAAAAGGGGAAAATCCTAGCTATTAAAGGGTTAGGTGGATATCACTTAGTTGTAGATCCAATGAATCAT GAAGCTGTAAAAGAATTAAGAAAAAGAAAAAAACGGGATGAAAAACCTTTTGCTTTAATGTCATCTCAATTAGATGATGT GAAAAATTTTGCTGAAATAACAAAAAATGAAGAAACTTTATTAGTTTCTAAAGAACGACCAATTGTGTTATTGAACAAAA AGGATAATGAGTATATTTCTTCAGATGTTGCATCTAGTAATAATACCTATGGGGTAATGTTAGCCTATACACCACTTCAT CATCTTATTTTAAGAGGGAATTTTATTTCATTAATAGCTACGAGCGCCAATGTTTCTGATGAACCTATTGTATATAAAGA TGGAGATGCAATTGAGCAGCTAAAGGGAATTGCAGATTATTATTTAGTACACAATAGGGAGATATTCACTAGAGTAGATG ACTCTATTGTTAGGGGGATTGATTTAGATGATGAAGTAATAAAACTACAAATAATTCGTCGCGCTAGAGGTTATGTACCA AACCCAATTGATTTTAAAGAAGGATCACCTAATGTACTTGCTTTAGGAGCAGAATTAAAGAATACGATTTGCTTAACTAA AGGTGAAAAAGCTTTTATTAGTCATCATATTGGTGATTTAAAAAACTATAAAATTTATGAATCGTTTAAAAATACTATAG CTCACTTACAAAAAATCTTTGAAATTAGTCCTTCTGTAATTGCAAGTGATCTTCATCCTGATTTTTATAGTACAAAATAT GCATTTGATCAAAATGTTTTACCAGTTGTACAGGTTCAGCATCATCATGCCCACATGGCTTCTTGTATGGTTGATAATCA ATTAGATGGTCCTGTTTTAGGAGTTATTTTAGATGGTACGGGTTATGGTGATGATGGGAATATTTGGGGTGGAGAGTTTT TAATCGGTGATTTTCTTAATTATGAAAGAGCGGCATATATCGATTACTTTCAGCTGCCAGGCGGTGATAAAGCTGTTAAA GAACCGTATAGAATTGCTTTAGGAATATTGACGCAAATATATGGTGAACAAGTCAAAGAATTACCAATAAAGATAATTTC AGAGCGAAATAGTTTTGAACTAGATGTACTTATAAAAATGATTCAAAAAGGAATTAATTCTCCTCTTACTTCAAGTATGG GAAGGCTTTTTGATGCTGTTTCAGCACTATTGGGTGTCTGTGAAACAGTCCAATATGAAGGACAGGCTGCTATTGAGTTG GAGCAAGCGATTGATATCAATAATTCTTCCAATCCTTTATTATCATATGAAATAGTTGCTTCGAATGGAATTAGAAAAAT CGATATAAAACCTATGTTTAAAGAGTTGGTATCTTTGATACTTAAAGATAAGTATACCAAGGGTGAATTGAGCTATCGTT TTCATTATACAATGGTTCAAATGATTACAGAAACCTGTAAACAAATTCGTCAAGAAACAGGGATTAATAAACTAGTTCTT AGTGGGGGAGTATTTTTAAATAAGTTTTTACTTGTAGAAACCTATAAGTCACTTAAGGCTTGTAAATTCGAGGTTTACAT GCACAAACAAGTACCTACCAATGATGGGGGAATCTCTCTTGGTCAAGCAGCAATAGCAGCTCATCGCTATAAAGATATGC ATTCGGTATAA
Upstream 100 bases:
>100_bases AAAGAAAGACAAGTACTCATGGAAGCAAAATCAGGTGAATTGAAACTCATTGAGTTATTATATGGGGCAGAATTACCTCG ATTATGTTAGGAGACAATTT
Downstream 100 bases:
>100_bases ATTTACAATAGCAATTATATAACTTTTCATTATTCTTTGTGAGTATAGTAAAAACGAAAAATTAGGAGGTGCTCTTTTAT GGTAGTTAGTTCAAAAATGG
Product: [NiFe] hydrogenase maturation protein HypF
Products: NA
Alternate protein names: Carbamoyl phosphate-converting enzyme hypF2; [NiFe]-hydrogenase maturation factor hypF2; Hydrogenase maturation protein hypF2 [H]
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYHLNGWVLNDSNGVLIEVEGEQNNISHFIHDIEFNSPELAYVQEVKL IEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMS KFPMCKECDIEYKDILDRRFHAQPNACWKCGPQVQLKTTDGTNVSTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNH EAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEETLLVSKERPIVLLNKKDNEYISSDVASSNNTYGVMLAYTPLH HLILRGNFISLIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDDEVIKLQIIRRARGYVP NPIDFKEGSPNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKY AFDQNVLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYERAAYIDYFQLPGGDKAVK EPYRIALGILTQIYGEQVKELPIKIISERNSFELDVLIKMIQKGINSPLTSSMGRLFDAVSALLGVCETVQYEGQAAIEL EQAIDINNSSNPLLSYEIVASNGIRKIDIKPMFKELVSLILKDKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVL SGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDMHSV
Sequences:
>Translated_776_residues MKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYHLNGWVLNDSNGVLIEVEGEQNNISHFIHDIEFNSPELAYVQEVKL IEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMS KFPMCKECDIEYKDILDRRFHAQPNACWKCGPQVQLKTTDGTNVSTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNH EAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEETLLVSKERPIVLLNKKDNEYISSDVASSNNTYGVMLAYTPLH HLILRGNFISLIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDDEVIKLQIIRRARGYVP NPIDFKEGSPNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKY AFDQNVLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYERAAYIDYFQLPGGDKAVK EPYRIALGILTQIYGEQVKELPIKIISERNSFELDVLIKMIQKGINSPLTSSMGRLFDAVSALLGVCETVQYEGQAAIEL EQAIDINNSSNPLLSYEIVASNGIRKIDIKPMFKELVSLILKDKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVL SGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDMHSV >Mature_776_residues MKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYHLNGWVLNDSNGVLIEVEGEQNNISHFIHDIEFNSPELAYVQEVKL IEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMS KFPMCKECDIEYKDILDRRFHAQPNACWKCGPQVQLKTTDGTNVSTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNH EAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEETLLVSKERPIVLLNKKDNEYISSDVASSNNTYGVMLAYTPLH HLILRGNFISLIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDDEVIKLQIIRRARGYVP NPIDFKEGSPNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKY AFDQNVLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYERAAYIDYFQLPGGDKAVK EPYRIALGILTQIYGEQVKELPIKIISERNSFELDVLIKMIQKGINSPLTSSMGRLFDAVSALLGVCETVQYEGQAAIEL EQAIDINNSSNPLLSYEIVASNGIRKIDIKPMFKELVSLILKDKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVL SGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDMHSV
Specific function: Along with hypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carb
COG id: COG0068
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YrdC-like domain [H]
Homologues:
Organism=Escherichia coli, GI2367152, Length=767, Percent_Identity=37.4185136897001, Blast_Score=474, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001792 - InterPro: IPR017968 - InterPro: IPR004421 - InterPro: IPR017945 - InterPro: IPR006070 - InterPro: IPR011125 [H]
Pfam domain/function: PF00708 Acylphosphatase; PF01300 Sua5_yciO_yrdC; PF07503 zf-HYPF [H]
EC number: NA
Molecular weight: Translated: 88061; Mature: 88061
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00150 ACYLPHOSPHATASE_1 ; PS51160 ACYLPHOSPHATASE_3 ; PS51163 YRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYHLNGWVLNDSNGVLIEVEGEQNNISH CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHH FIHDIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLE HHEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCCCEEECCCHHHHHHHHH ELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMSKFPMCKECDIEYKDILDRRF HHHCCCCCEEECCEEEECCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHH HAQPNACWKCGPQVQLKTTDGTNVSTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNH CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCH EAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEETLLVSKERPIVLLNKKDNEYIS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHH SDVASSNNTYGVMLAYTPLHHLILRGNFISLIATSANVSDEPIVYKDGDAIEQLKGIADY HHHCCCCCCEEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHH YLVHNREIFTRVDDSIVRGIDLDDEVIKLQIIRRARGYVPNPIDFKEGSPNVLALGAELK HEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHC NTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKY CEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHCCEE AFDQNVLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLN ECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHC YERAAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNSFELDVLIKM CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHH IQKGINSPLTSSMGRLFDAVSALLGVCETVQYEGQAAIELEQAIDINNSSNPLLSYEIVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE SNGIRKIDIKPMFKELVSLILKDKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVL CCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEE SGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDMHSV CCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYHLNGWVLNDSNGVLIEVEGEQNNISH CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHH FIHDIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLE HHEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCCCEEECCCHHHHHHHHH ELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMSKFPMCKECDIEYKDILDRRF HHHCCCCCEEECCEEEECCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHH HAQPNACWKCGPQVQLKTTDGTNVSTDNPIEKTIDLLKKGKILAIKGLGGYHLVVDPMNH CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCH EAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEETLLVSKERPIVLLNKKDNEYIS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHH SDVASSNNTYGVMLAYTPLHHLILRGNFISLIATSANVSDEPIVYKDGDAIEQLKGIADY HHHCCCCCCEEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHH YLVHNREIFTRVDDSIVRGIDLDDEVIKLQIIRRARGYVPNPIDFKEGSPNVLALGAELK HEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHC NTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISPSVIASDLHPDFYSTKY CEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHCCEE AFDQNVLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLN ECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHC YERAAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNSFELDVLIKM CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHH IQKGINSPLTSSMGRLFDAVSALLGVCETVQYEGQAAIELEQAIDINNSSNPLLSYEIVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE SNGIRKIDIKPMFKELVSLILKDKYTKGELSYRFHYTMVQMITETCKQIRQETGINKLVL CCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEE SGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDMHSV CCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9799289; 12948488 [H]