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The map label for this gene is nlpB [H]

Identifier: 227082281

GI number: 227082281

Start: 2242394

End: 2243413

Strand: Reverse

Name: nlpB [H]

Synonym: VCM66_2079

Alternate gene names: 227082281

Gene position: 2243413-2242394 (Counterclockwise)

Preceding gene: 227082282

Following gene: 227082280

Centisome position: 77.56

GC content: 49.41

Gene sequence:

>1020_bases
ATGAAGTTTTCTCGCCAGCTAGTTCTCGGTTCACTGGCTGTTTTGGTTTTAAGTGCTTGCTCCAGCAGCCCCACGCAACG
ACGCCAAGCCAAAGACGATTTCGACTATCTCGAAACCACAGAATTTAAGCCTTGGGTTTTGCCACAAGGTGCCACTCCGC
AGTTTTATCCTAACTATGATATTCCGCAGGGGGCGTTTCATGGTGGCGTGGGCAATGTGGTCGATATTCGCCCGCCACAA
CAAGTGTTGGAACTCATCCCTGGTGCTCGCGCAGAACGTCAAAATGGCGAAGTGACCTTATGGATGTTGCGCCAAGATGA
AGCGCAAAAAGTGTGGGATACCGCACTGAAAATGATTGCGGAGCGCAAAATCCCTCTTCGTAAGCAAACCGATTCTATGG
TGGAAACGGACTGGGTCGATTGGGTATCAGAAGATGAAGATGTGACGATTGGTAGCCGCTACTTAATGTCGATGGTGGAA
ACCAATAATCGTTATGGCTTTAAAATTTCGCTGATTGGTTGGCGTGAAAATGGTCAAGTGCAAACGGTCAGTACCACCAA
TAAAGAGCGTTACAACGCCTTTATGACCAACTTGGTCACCACTCGTTACGACTCCGATGTGCGTGCGGAAGCGGCGCGCC
GTGCCCAAGAGCTGGTTAAGCAAATTCCGATTACCATGGGCTCAGATCGCAGTGGATTCCCTGTGATCATTGCGCGTACG
CCTTACGATGTACTGTGGCAACGTTTGCCAGAGTTACTGCCCAAAATGGGCTTTACTATTGAAGAGCGTAACCAGTCACA
AGGTACGGTCAAAGCCAAATACGCTGCACCAGATGATGAATTCTGGCAACAGGTTGGTGTTAAACCGATTGAGCTTAAAT
CCGGGACTTACACCTTCCTCTTTGGTGACTTGGGTAACCGTACGTCGATTAACGTGACCGACTCAGCGGGTAAACCGGTC
AACGAAGCGCTGTTGAAAGAGATGGTGCCAGTGCTCTCAGCAGTGGTGGATAAGAAGTAA

Upstream 100 bases:

>100_bases
CCCAATCGTTGCCCAAGCCCTGTCTGAAGCCTGTATTTATTAAGGCGCGATCCATTACAATGCCGGGGTATCATGACCCC
GGCAATTTTTAGGAGTTTCA

Downstream 100 bases:

>100_bases
TGAAAAAGAAGGGATGCCAAGGCATCCCTTTGTTTTTGTGGTCATCCCTAAACCACCGTTTTTAGCGGTAGTCATTGTTT
TGCGATTTGTCGTTACCCGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKFSRQLVLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK

Sequences:

>Translated_339_residues
MKFSRQLVLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK
>Mature_339_residues
MKFSRQLVLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=335, Percent_Identity=29.2537313432836, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 38362; Mature: 38362

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSRQLVLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPNYD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCEECCCCCCCCCCCCCC
IPQGAFHGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIA
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQV
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
QTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECC
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFL
CHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCEEEEE
FGDLGNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDKK
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFSRQLVLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGATPQFYPNYD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCEECCCCCCCCCCCCCC
IPQGAFHGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIA
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQV
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
QTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECC
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFL
CHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCEEEEE
FGDLGNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDKK
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]