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The map label for this gene is ccmC [H]

Identifier: 227082182

GI number: 227082182

Start: 2148173

End: 2148925

Strand: Reverse

Name: ccmC [H]

Synonym: VCM66_1979

Alternate gene names: 227082182

Gene position: 2148925-2148173 (Counterclockwise)

Preceding gene: 227082183

Following gene: 227082181

Centisome position: 74.29

GC content: 50.46

Gene sequence:

>753_bases
ATGTGGAAATGGCTTCATCCCTATGCCAAACCTGATGCCGCTTACCAGCTGTGTGGTAAGTTGTTGCCTTGGTTTGCCAG
TTTAGGATTCCTGTTTCTTGCGGTAGGAACGGTGCTCGGTTTGGCCTATGCACCTGCGGATTACCAACAAGGGGACAGTT
TTCGAATCATCTATATCCATGTTCCCGCAGCGATATGGTCGATGGGGGTTTACATGTCGATGGCCATCGCCGCATTTATC
GGGATAGTCTGGCAACTGCGTATTTCGGATATGGCCGCGTTAGCCATGGCACCCATCGGCGCGGTGTACACCTTTATTGC
CCTTATCACTGGTGCTATTTGGGGCAAACCGATGTGGGGAGCCTGGTGGGTGTGGGATGCGCGTCTCACCTCTGAGCTTG
TTCTGCTGTTTCTCTATTTAGGGGTTATTGCGCTTTATCATGCGTTTGATGACCAAAAAACTGCGGCAAAAGCGGCGGGT
ATATTAGCCATCGTCGGAGTGATTAACCTGCCTATCATTCACTTCTCCGTTGAGTGGTGGAACACCTTGCACCAAGGTGC
CACGATCACTAAGTTTGCCAAACCATCGATCGCACCAGAAATGTTATGGCCACTGCTCGCTTGTATCTTGGGTTTTGCGT
TCTTTTTTGCTGCATTGACCATGATCCGCTTACGCAATGAAATTTTGAGCCGAGAAAGCCACCGTCCTTGGGTGAGTGAG
CTTGCCAACCAAACCGTGCGAGGAAATCGGTAA

Upstream 100 bases:

>100_bases
TGTGCATTGATTGTTTTCGATCAAGCACGAAAATACTGCGTTAGATAAATTATAACAACTTAGTTAAAACTCAATAATTT
GAAAGCAAAGTGAGATAAAC

Downstream 100 bases:

>100_bases
TGCATTTTGACTCTTTCAGTGATTTTTTAGCGATGGGCGGTTATGCCGCTTACGTTTGGAGTGCTTTCGGTTTGACTTAT
CTTTCCATGGCGATGTTGTG

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIHVPAAIWSMGVYMSMAIAAFI
GIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWGAWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVINLPIIHFSVEWWNTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
LANQTVRGNR

Sequences:

>Translated_250_residues
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIHVPAAIWSMGVYMSMAIAAFI
GIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWGAWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVINLPIIHFSVEWWNTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
LANQTVRGNR
>Mature_250_residues
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIHVPAAIWSMGVYMSMAIAAFI
GIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWGAWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVINLPIIHFSVEWWNTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
LANQTVRGNR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=241, Percent_Identity=64.3153526970954, Blast_Score=317, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27962; Mature: 27962

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VPAAIWSMGVYMSMAIAAFIGIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAGILAIVGVINLPIIHFSVEWW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
NTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
HHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LANQTVRGNR
HHHHHCCCCC
>Mature Secondary Structure
MWKWLHPYAKPDAAYQLCGKLLPWFASLGFLFLAVGTVLGLAYAPADYQQGDSFRIIYIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VPAAIWSMGVYMSMAIAAFIGIVWQLRISDMAALAMAPIGAVYTFIALITGAIWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWWVWDARLTSELVLLFLYLGVIALYHAFDDQKTAAKAAGILAIVGVINLPIIHFSVEWW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
NTLHQGATITKFAKPSIAPEMLWPLLACILGFAFFFAALTMIRLRNEILSRESHRPWVSE
HHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LANQTVRGNR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]