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The map label for this gene is bepC [H]

Identifier: 227081774

GI number: 227081774

Start: 1688892

End: 1690229

Strand: Direct

Name: bepC [H]

Synonym: VCM66_1561

Alternate gene names: 227081774

Gene position: 1688892-1690229 (Clockwise)

Preceding gene: 227081772

Following gene: 227081775

Centisome position: 58.39

GC content: 46.26

Gene sequence:

>1338_bases
ATGGCCCACACTGGGGAGAACGTTTTGAAAGGATTACCATTAAAGGCGATTGCGCTCGCTATCGCATTGAGCAATCCGGT
TTCTGCGCAAACGTTGGAGCAAGCTGTATCCATCACGTTGGCATCCAACCCGGAGCTAAAAAGCGCATTTAATCAATTTA
AAAGTCGTGAATATGATGCAGAGGCATCGTCAGGCGCTTACTTACCGAAAATCGATCTTGATGCAGGTATCGGTTATGAG
GCAATTAATCCTGCAGAATCTAGTGGTAATAGAAACACAGATTTAACTCGTAAAGATGCTACCCTTACCCTCACTCAATT
GATTTGGGATGGGTCTGCCACACTGAATGATATGGATAGAACGGCAGCGGAAGCTGAGGCGGATCGCTATCAGTTATTAG
CCGATGCCTCTAACATGGCTCTGGAAGTCGCCAAGATTTATCTGGACGCAACCAAAGCTTCTGAAATTCTAACGCTGTCA
GAAAACAATCTGGCTATTCATAAAGATATCTACCGCGATATTAAAAAGCGCGCCGATTCAGGGATTGGCTCTACGGCCGA
TGTGACTCAAGTTGAGGCTCGTTTAGCAAAAGCGCACAGCAACTTGGTGGCTGCACAAAACAATCTTTTTGACATCTACA
CTCAGTTTCGCCGTTTAGTGGGTCAAGAACCTGTGAGCTTAGAGTTTCCTCGTGCCGATCAAAATGCGATACCGCCGACA
TTAGAAAATGCTTTAAATATGGCGCAAGAAAATCATCCAGTGATTAAGGTTGCTCAAGCGGATGTGGATGCAGCACGCTT
CCAGTATAAGCAGTCTAAAGCGCCAAATTACCCCACACTCTCTTTCGAAGCGGCTCAAAGCTGGCGTAATGATGCAGGCG
GTATTGAGGGCAGCAGTGATGAGCTCAGTGCGATGCTCCGTTTGCGTTACAATCTCTACAATGGCGGCAGTGACAGTGAT
CGTACAGAAAGTGCGGCTTATCAACTCAATCGTTCCAAGGATCTGCGTGAAAAAACCTTCCGTACCGTTGAGGAAGGGCT
TCGCTTATCTTGGAGTGCCTTGGATCTCACTCTGCAACAGAAACAGTTTTTGGCAGATCACGTTGATTCTGCATCCAAAA
CGGTTGTTTCGTATCGTAAACAGTATCAAATCGGCCAGCGTACATTGCTCGATCTCCTCAACACTGAGAATGAGCTTTTC
GAGGCACGCAAGGACTACCTCGATGCACGATATGCTGAACAATATGCAAAATATCGTGTCATGAATGCATCTGGTAACTT
GTTAGATGCCTTAAGAGTCGATATCCCGCAGGAATGGACAGCTAAGGTGGAGTACTAA

Upstream 100 bases:

>100_bases
GATACGCTTCTCGCGTGCGTCATATTGTTGACGTCAAATATCCTATATGTCTTATAAATGATAATGAATCTGGATTAGAC
TAAAGGTCATTCATTGAGTA

Downstream 100 bases:

>100_bases
TATGTCAATCAAATCATGGGCTCTGCCACTATTTCTTTGCACTGTAACCACGTCGGCATTGGCAAATCAAGGTCAATATA
CAAAGCACGAAGGTGATGAG

Product: agglutination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MAHTGENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYE
AINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLS
ENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPT
LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSD
RTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELF
EARKDYLDARYAEQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY

Sequences:

>Translated_445_residues
MAHTGENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYE
AINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLS
ENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPT
LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSD
RTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELF
EARKDYLDARYAEQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY
>Mature_444_residues
AHTGENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEA
INPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSE
NNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTL
ENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSDR
TESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFE
ARKDYLDARYAEQYAKYRVMNASGNLLDALRVDIPQEWTAKVEY

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=427, Percent_Identity=25.5269320843091, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49376; Mature: 49245

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTGENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDA
CCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCC
EASSGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDR
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCHHHHHH
TAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCC
GIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPT
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSD
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCCCCCCHH
ELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEHHHHHHHHHH
KQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRV
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE
MNASGNLLDALRVDIPQEWTAKVEY
ECCCCCCHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure 
AHTGENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDA
CCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCC
EASSGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDR
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCHHHHHH
TAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCC
GIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPT
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSD
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCCCCCCHH
ELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEHHHHHHHHHH
KQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRV
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE
MNASGNLLDALRVDIPQEWTAKVEY
ECCCCCCHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]