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The map label for this gene is 227081762

Identifier: 227081762

GI number: 227081762

Start: 1671743

End: 1672969

Strand: Direct

Name: 227081762

Synonym: VCM66_1549

Alternate gene names: NA

Gene position: 1671743-1672969 (Clockwise)

Preceding gene: 227081761

Following gene: 227081764

Centisome position: 57.8

GC content: 49.14

Gene sequence:

>1227_bases
GTGGGGCTATCTTCTGCCGCTTGGTTTGGCGCTACTTCTGATCCGCAAGCATTTAGCGCGGGAAATGGGAGCAGCCGTAT
GACCCTATTTGAGCTATTTAAAGCAGAATTAAAAGCACTCTTCACCAACCCTGTTGTCGTGCTGACCGTTTTTGGTGGCG
TGGTGTTTTATTCTTTCCTCTACCCGCTGCCTTACGCCAAGCAGATCCCCCGTGAACAGACCGTTTCTGTGGTCAATCTC
GATCAAAGTCAGGCCAGTTTTCAACTGGAGCGGATGGTGGATGCCACACCGCAAGTCAAAATTGTTCAGCGTGATCACAC
CATTGCCGATGCCAAACAAGCTTTCTTAGACAAGAAAGTGGCTGGCATACTGGTTATCCCTGAGCATTTCTACAAAGACT
TATTGTTAGGGAAAAGCCCAACGCTCGCTTATGCGGGTGATGCTTCCTATTTTCTGGTTTACGGTACGATTGTTGAAGGT
TTAGCCCAAGCGGGCGGTACACTCGCAGCACAAACCAAAGTCAGTCGTTTGGTCATCGAAGGTGAACCGATGGCGTTTGC
CGCGCAGCATTTCTCGCCAACCAGTGCCAACCTGAAACCCACTTTTAACCCACGCATGGGTTATGTCGATTACGTCGTAC
CTGCCGTTTTTGTATTGATCCTGCAGCAAACGCTGATCATGGCAGCTGGATTGATGGTTGGGACACAAAAGCAAGGCCAC
GGCTATTGGAGCCGAGTCGCTCCTGCCAAACTGTTATTAGTGCGTAGTTTTGTGCTGGTTGCGGTCTACTACTTGCTCAG
TCTTTATTATTTCGGTGCCAGTTTTGATTTGCACGGCGTGAATACTTTAGCAAAGCCAAATGATCTTATTAGTTTGCTCC
TGCCGTTTTTATTAGCCTGTAATTTTGTCGGTATTGCGTTAGGTGCAGTGACTCCAAGACGCGAACTGGTCACTTTGGTG
GTGTTAATTAGCTCCATGCCACTGATTTTTACCGCTGGATTTATTTGGCCGTTGGAAATGATCCCTGCGCCTTTAGTCTG
GCTTGCGCAGTGCTTCCCAAGCACGCCGGCAATCCAAGGCTTTCTGGGTTTAAACCAAATGGCGGCCAGTTGGTCAACCA
TAGCACCAAAATGGACACTCCTTTGGGCACAGGCTTTGGTATGGGGCGGTTTGGCGTTTTATCTTTTACGCCGAGTTCGC
CAGCGTACCGCTAAACCCCCACAATAA

Upstream 100 bases:

>100_bases
GGCGCAATTTGTTACCGATCAGCCACTACATTGAAGTGCAAGTGAACCAAGTGAGCTATGGGCTTGAGGCCTTAAGTTCT
TTACAACCTATGGTCAATAT

Downstream 100 bases:

>100_bases
TGTCTACTCTTGCCACTGTTGACGCATGCGTTCGACAGTGGCTTCATCCACCCCATGCACGTTTTGATAACGTTCTCGGC
ACACCAGAATCGTTAGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; Conserved Transporter; ABC Transporter Transmembrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; Permease Component Of ABC Transporter; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; ABC-2 Type Transporter Domain Protein; ABC Transporter Permease; ABC-2 Type Transporter Family; Integral Membrane Protein; ABC-Type Multidrug Transport System Protein; Abc-2 Type Transporter; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MGLSSAAWFGATSDPQAFSAGNGSSRMTLFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNL
DQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEG
LAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGH
GYWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLV
VLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLWAQALVWGGLAFYLLRRVR
QRTAKPPQ

Sequences:

>Translated_408_residues
MGLSSAAWFGATSDPQAFSAGNGSSRMTLFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNL
DQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEG
LAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGH
GYWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLV
VLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLWAQALVWGGLAFYLLRRVR
QRTAKPPQ
>Mature_407_residues
GLSSAAWFGATSDPQAFSAGNGSSRMTLFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLD
QSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGL
AQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHG
YWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVV
LISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLWAQALVWGGLAFYLLRRVRQ
RTAKPPQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44620; Mature: 44489

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSSAAWFGATSDPQAFSAGNGSSRMTLFELFKAELKALFTNPVVVLTVFGGVVFYSFL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YPLPYAKQIPREQTVSVVNLDQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKV
HCCCCHHHCCHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHH
AGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIE
CCEEEECHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCEEHHHHHHEEEEC
GEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGH
CCCCEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GYWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NFVGIALGAVTPRRELVTLVVLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQG
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
FLGLNQMAASWSTIAPKWTLLWAQALVWGGLAFYLLRRVRQRTAKPPQ
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GLSSAAWFGATSDPQAFSAGNGSSRMTLFELFKAELKALFTNPVVVLTVFGGVVFYSFL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YPLPYAKQIPREQTVSVVNLDQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKV
HCCCCHHHCCHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHH
AGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIE
CCEEEECHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCEEHHHHHHEEEEC
GEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGH
CCCCEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GYWSRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NFVGIALGAVTPRRELVTLVVLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQG
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
FLGLNQMAASWSTIAPKWTLLWAQALVWGGLAFYLLRRVRQRTAKPPQ
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA