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The map label for this gene is yjcR [C]

Identifier: 227081760

GI number: 227081760

Start: 1669683

End: 1670657

Strand: Direct

Name: yjcR [C]

Synonym: VCM66_1547

Alternate gene names: 227081760

Gene position: 1669683-1670657 (Clockwise)

Preceding gene: 227081759

Following gene: 227081761

Centisome position: 57.72

GC content: 51.38

Gene sequence:

>975_bases
ATGAAAACGGTAAAAACGACCTTAATGACGCTCACCGCTGTCGCTGTTGTTGGCTGGATTGGCTATCGCTTTTATCAAGC
CTATCAACCTGAGCCAGTCACACTGCAAGGCCAGATTGAGTCTCAGCAGTACAGCATCTCCTCTAAAGTGCCGGGGCGCA
TTGACCAAGTTTTGGTGCGCAAGGGCGATCAAGTGGAAAAAGGCCAACTGATCTTCACTCTACTCAGCCCTGAAATTGAT
GCCAAGTTGGAACAAGCGATCGCCGGCCAGAAAGCCGCGGGGGCACTGGCTCAAGAAGCAGAAAATGGTGCGCGTGAACA
GCAGATTCAGGCCGCCAAAGATCAATGGCTCAAAGCCCAAGCGGCAGCAGAACTGGCTGAAAAAACGTATCTGCGCGTCA
ATAACCTTTACAACGATGGTGTGGTTTCCGAACAAAAACGGGACGAAGCGCAAACCCAATGGCAAGCCGCCAAATACACC
GAAAGTGCAGCGTTGCAGATGTACCAATTAGCCAAAGAAGGTGCACGAGAAGAGACGAAACAAGCCGCGCTCGAAAAAGC
ACGCATGGCTGCTGGTGCGGTGGCTGAAGTCGAGGCATATGCCGCCGATACCAAGATTCAAAGTTGGTTTGATGGTGAAG
TATCACAAGTCTTGATGCACAGTGGTGAGCTGGCTCCGCAAGGTTTCCCTGTCGTCACTGTGGTCGATACGCAAGACACT
TGGGCAGTATTTAACGTGCGTGAAGATCTGCTCAAACACTTTACCCAAGGTGCTCAGTTTACGGCTTATTTGCCAGCTCT
GAATAAATCCATCGAGTTTAAAGTCACTCACGTCGCCGTGATGGGCGATTTCGCCACTTGGCGCTCAACCGATGCCACTC
AAGGGTTTGACCTGCGTACGTTTGAAGTGGAAGCACGTCCAGTCACGCCAACCGAAGGCCTGCGTATGGGCATGAGCGTT
GTGGTTAAGTTATAA

Upstream 100 bases:

>100_bases
CTCTGTCGAGCGAGATGAGCAGCTTCTCCACTTACCATCAATCCGCAGTTGCTCTCTCTTCACTGCACCAAAGCGCCACG
GCTAAGTAAAAGGAATCCAA

Downstream 100 bases:

>100_bases
GTTGTGGTTGAACTTAAAATGAAGCACGCCATCCCCCGTCAATGGACGTTACTGCGTCACGATAAATGGTTATTTTCCTG
TTTAACATGGGTGCCCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEID
AKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYT
ESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT
WAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARPVTPTEGLRMGMSV
VVKL

Sequences:

>Translated_324_residues
MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEID
AKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYT
ESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT
WAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARPVTPTEGLRMGMSV
VVKL
>Mature_324_residues
MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEID
AKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYT
ESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT
WAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARPVTPTEGLRMGMSV
VVKL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35773; Mature: 35773

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHH
KGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQ
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT
HHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC
WAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT
EEEHHHHHHHHHHHHCCCCEEEEHHHHCCCEEEEEEEEEEEECCHHHCCCCCCCCCCEEE
FEVEARPVTPTEGLRMGMSVVVKL
EEEECCCCCCHHHHHHHHHHEEEC
>Mature Secondary Structure
MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHH
KGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQ
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETK
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT
HHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCC
WAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT
EEEHHHHHHHHHHHHCCCCEEEEHHHHCCCEEEEEEEEEEEECCHHHCCCCCCCCCCEEE
FEVEARPVTPTEGLRMGMSVVVKL
EEEECCCCCCHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]