Click here to switch to the map view.

The map label for this gene is ykgB [C]

Identifier: 227081740

GI number: 227081740

Start: 1646262

End: 1646702

Strand: Direct

Name: ykgB [C]

Synonym: VCM66_1527

Alternate gene names: 227081740

Gene position: 1646262-1646702 (Clockwise)

Preceding gene: 227081735

Following gene: 227081742

Centisome position: 56.91

GC content: 40.14

Gene sequence:

>441_bases
ATGCACGACTCGAAAACGCACAACCTAACAACTCAATACAGCTATCTTATCGGTGTGTTGGGGGTATCACTGATCTTGAT
TTGGTTGGGGATTTACAAATTTACCCCCACCGAAGCCAAATTAATCGAGCCTTTGGTACTTAACCACCCCTTGATGGGCT
GGACTTACCAATTTCTCTCCGTACAAGCGGTTTCTAACCTAATTGGTGCGACAGAAATAATAGTAGGGATTGGTTTATTG
ATTGGATTACGCTCTTCTAAAGTAGCTTATTACTCTGGCATTGCGAGCGTGGTGATTTTTATTAGCACTTTAAGTTTTCT
GATCACAACGCCTGATACTTGGAAGGTATCGGATGGGATTTTGGTTCCAAACTTCTTTTTATTGAAAGATATTCTCTTTT
TAGCGGTAGCGATTCACGTTATTGAGAAAAATAAAGTGTAG

Upstream 100 bases:

>100_bases
GAATGAATTTTTCAACCTCTCAGGTCATCTCCTTTGAACCAGCAAATGTGAACTCATTTTTGCTCAATAATTCTTTGTAT
ATCTGTTTAAAGGAGCTTTC

Downstream 100 bases:

>100_bases
TCATTAAGTCAATATTCATTGTCCAAGTGTTGATGTAAGCCTATCTATAAAAAAATAGAGCGTCGATTGACGCTCTATTT
TTATTCACTCCACCTTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHDSKTHNLTTQYSYLIGVLGVSLILIWLGIYKFTPTEAKLIEPLVLNHPLMGWTYQFLSVQAVSNLIGATEIIVGIGLL
IGLRSSKVAYYSGIASVVIFISTLSFLITTPDTWKVSDGILVPNFFLLKDILFLAVAIHVIEKNKV

Sequences:

>Translated_146_residues
MHDSKTHNLTTQYSYLIGVLGVSLILIWLGIYKFTPTEAKLIEPLVLNHPLMGWTYQFLSVQAVSNLIGATEIIVGIGLL
IGLRSSKVAYYSGIASVVIFISTLSFLITTPDTWKVSDGILVPNFFLLKDILFLAVAIHVIEKNKV
>Mature_146_residues
MHDSKTHNLTTQYSYLIGVLGVSLILIWLGIYKFTPTEAKLIEPLVLNHPLMGWTYQFLSVQAVSNLIGATEIIVGIGLL
IGLRSSKVAYYSGIASVVIFISTLSFLITTPDTWKVSDGILVPNFFLLKDILFLAVAIHVIEKNKV

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16135; Mature: 16135

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSKTHNLTTQYSYLIGVLGVSLILIWLGIYKFTPTEAKLIEPLVLNHPLMGWTYQFLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
VQAVSNLIGATEIIVGIGLLIGLRSSKVAYYSGIASVVIFISTLSFLITTPDTWKVSDGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LVPNFFLLKDILFLAVAIHVIEKNKV
ECCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHDSKTHNLTTQYSYLIGVLGVSLILIWLGIYKFTPTEAKLIEPLVLNHPLMGWTYQFLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
VQAVSNLIGATEIIVGIGLLIGLRSSKVAYYSGIASVVIFISTLSFLITTPDTWKVSDGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LVPNFFLLKDILFLAVAIHVIEKNKV
ECCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA