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The map label for this gene is glpQ [H]

Identifier: 227081709

GI number: 227081709

Start: 1614158

End: 1614871

Strand: Direct

Name: glpQ [H]

Synonym: VCM66_1495

Alternate gene names: 227081709

Gene position: 1614158-1614871 (Clockwise)

Preceding gene: 227081708

Following gene: 227081714

Centisome position: 55.8

GC content: 47.9

Gene sequence:

>714_bases
ATGATGCCTTCAATCATCGTCGGCCACCGTGGGGTGGCTGGAACGTATCCAGAAAATACCCGTGTCAGTGTACAAGCCGC
TATCAACCTTGGTTTATCTTGGGTGGAAGTGGATGTGCAGCCGACCAAAGACAATGTACTGGTTGTGTGTCACGACCATA
CGATTGACCGTTGCAGTAATGGCAAAGGTCGCATTGATGAGTACACACTCGCCGAACTCAAGCAACTTGATTTCGGTGCT
TGGTTTGATCCTCGTTTTGCGGGCGAAACCATCATGACGCTGGAAGAGCTGCTGGTGCTCGCCGCCGAACACGATTTAGG
ACTCAATATTGAAGTCAAAGTCGATAAGCATGATGTGGCCAGTGTTGTACAACAGTTGAAAGCGCAACTTGACCAGAGCC
CGCTGGTTGCCGACAAAATCTTACTGTCGAGCTTTAGCCACGACATTATTTTGCAACTGCACCAGCATTGTCCGGGTTAT
AAATTGGGGATTTTGAGTGAGCGTTTGACTCAGCGGGATCGCCAAGTGCTTAAACAGGTGAATGCGTTTAGCTGTAACCT
CAACTACCGCTGGATCACAGAAAAACACATCCGCGATTTGAAAAATGGTGGCTACCAGATTTGGTGTTACACCCTCAATC
AAGTGGATAAATTCCGCTATTTAGACAAAGTCGATGCCATTTTCTCCGACTTCCCAGAGCGCTTTATCAACTAG

Upstream 100 bases:

>100_bases
CTTCGTCGATAAAAGTACGCCTGCTTTTCAACAGTTGTCCCTTTTGTACCACGTCGAACTTATTGAATCGTGATTTGAGT
GTGATTCTCACTAAGGAAGC

Downstream 100 bases:

>100_bases
TTTCTGCTTTCGGACTTCAGCAAAACGCCCATACAAATGGGCGTTTTTCATGGTTTCACTTCAGCGACTCAGTTTTTACT
CAAAAAAAGCTTTATCAACC

Product: putative glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MMPSIIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSNGKGRIDEYTLAELKQLDFGA
WFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVASVVQQLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGY
KLGILSERLTQRDRQVLKQVNAFSCNLNYRWITEKHIRDLKNGGYQIWCYTLNQVDKFRYLDKVDAIFSDFPERFIN

Sequences:

>Translated_237_residues
MMPSIIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSNGKGRIDEYTLAELKQLDFGA
WFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVASVVQQLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGY
KLGILSERLTQRDRQVLKQVNAFSCNLNYRWITEKHIRDLKNGGYQIWCYTLNQVDKFRYLDKVDAIFSDFPERFIN
>Mature_237_residues
MMPSIIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSNGKGRIDEYTLAELKQLDFGA
WFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVASVVQQLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGY
KLGILSERLTQRDRQVLKQVNAFSCNLNYRWITEKHIRDLKNGGYQIWCYTLNQVDKFRYLDKVDAIFSDFPERFIN

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=151, Percent_Identity=28.476821192053, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1789858, Length=234, Percent_Identity=28.6324786324786, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27048; Mature: 27048

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPSIIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSN
CCCCEEECCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCEEEEEECCCHHHCCC
GKGRIDEYTLAELKQLDFGAWFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH
SVVQQLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGYKLGILSERLTQRDRQVLKQV
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
NAFSCNLNYRWITEKHIRDLKNGGYQIWCYTLNQVDKFRYLDKVDAIFSDFPERFIN
CCEEECCEEEECCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMPSIIVGHRGVAGTYPENTRVSVQAAINLGLSWVEVDVQPTKDNVLVVCHDHTIDRCSN
CCCCEEECCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCEEEEEECCCHHHCCC
GKGRIDEYTLAELKQLDFGAWFDPRFAGETIMTLEELLVLAAEHDLGLNIEVKVDKHDVA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH
SVVQQLKAQLDQSPLVADKILLSSFSHDIILQLHQHCPGYKLGILSERLTQRDRQVLKQV
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
NAFSCNLNYRWITEKHIRDLKNGGYQIWCYTLNQVDKFRYLDKVDAIFSDFPERFIN
CCEEECCEEEECCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]