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The map label for this gene is ugpE [H]

Identifier: 227081706

GI number: 227081706

Start: 1611331

End: 1612173

Strand: Direct

Name: ugpE [H]

Synonym: VCM66_1492

Alternate gene names: 227081706

Gene position: 1611331-1612173 (Clockwise)

Preceding gene: 227081705

Following gene: 227081707

Centisome position: 55.71

GC content: 46.5

Gene sequence:

>843_bases
ATGAAAAGTAATCGACTCTCCGATCATTTGATCCTTATCGCTGGCGCACTGTTTATGCTAGTGCCGCTGTGGCTGATTTT
CGCAAGCTCAACCCATCAGCCAAACACCATTGTCTCGGAAGGTTTGCAATGGACTCTTGGCGATAATCTCAGCGCAGTTT
ATCGCGAAGCATGGAATAAAAGCCTCGGTTTTGCCGGTAATGTCACCGCGCAAACCATGATCGTTAACTCGATGATCATG
GGCTTGGGTTTTGCGATTGGCAAAATCGTAATTTCGATGATGGCCGCTTACGCTTTGGTCTACTTTCGTTTGCCTTATGC
CAGCGCGTGGTTTTGGCTGATTTTCATTACCCTACTGCTGCCGCTTGAAGTGCGGATTATTCCCTCTTATGAAGTGGTGT
CCAATTTAGGCATGCTCAATAGCTACACCGGCTTAGTGCTACCCCTGATTGCCTCCGCTACCGCGACGTTTTTCTTCCGT
CAGTTTTTTAAAACCATACCGGATGAACTGTTGGAAGCGGCTCAGCTTGATAACGCAGGCCCTATACGTTTTTTTATCGA
TATTTTATTTCCCCTCTCGAAAACCATGATGGCCGCGATTTTCATCATCATGTTTGTGGTGGGTTGGAACCAATACCTGT
GGCCGATCATGATGACCACGGATGAGCAGTACAACACCATAGTGATGGGCATAAAACAGATTCTCAATAACATCAATGAA
ACCAGCTTGCCGCGTTATGACTACGCGTTTGCCATGGTGATCCTCGCCATGCTGCCACCGGTTTTGGTGGTGGTGATTTT
CCAACGTTGGTTTGTAAAAGGATTAGTCGAAAGTGAAAAATAA

Upstream 100 bases:

>100_bases
CAGCTCGGCGCAATCGGTGGTGTTACTCGTGTTAGTGCTGGCGCTGACTTGGTTGCAATTCCGTTTTGTTGAAAAACGTG
TTCATTACTAAGGAGTTACG

Downstream 100 bases:

>100_bases
TCAGAACTCCAATATTCATCTGCTACGCAGCGCCAAACACGCGGAGCCTGTTATGTTAGACATCAAACAGTTAGTCAAAA
CTTACGATAACGGCCATCAA

Product: glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNVTAQTMIVNSMIM
GLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFR
QFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE
TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK

Sequences:

>Translated_280_residues
MKSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNVTAQTMIVNSMIM
GLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFR
QFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE
TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK
>Mature_280_residues
MKSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNVTAQTMIVNSMIM
GLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFR
QFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE
TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=273, Percent_Identity=45.7875457875458, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI1790464, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787571, Length=154, Percent_Identity=25.3246753246753, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31667; Mature: 31667

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCCHHHHHHHHHCC
SLGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAG
HHHHEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCC
TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCCHHHHHHHHHCC
SLGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAG
HHHHEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCC
TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]