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The map label for this gene is ugpA [H]

Identifier: 227081705

GI number: 227081705

Start: 1610440

End: 1611321

Strand: Direct

Name: ugpA [H]

Synonym: VCM66_1491

Alternate gene names: 227081705

Gene position: 1610440-1611321 (Clockwise)

Preceding gene: 227081704

Following gene: 227081706

Centisome position: 55.68

GC content: 51.02

Gene sequence:

>882_bases
GTGCAACGTCGACAACATTTCGCTCACACTCCGCTGCCCTATTTGCTGCTTGCGCCGCAAATCGTGATCATCGCAGTGTT
CTTTATTTATCCTGCCGCACAAGCGATTTATCTCTCTTTTATGTTGGAAGATCCTTGGGGGCTCTCCTCGACTTTTGTTT
GGTTTGAAAACTATCAGGTACTGTTTAGCTCAACCGACTATCTTGACTCACTGGGCTTTACTCTGCTGTTTTCGGTGATT
GTCTCTTTTCTTTCGCTGGCGCTCGCGCTGTTACTCGCGGTAAAAGCCGACAACATCATTCATGGCCAAGGTTCGTATCG
TGTCACGCTAACGTGGGTGTATGCCGTCGCGCCAGCCGTCGCGGGCATCATTGGCGGTTTTCTGTTTAATCCGCACATTG
GTGTCCTGACCGACTTTTTCCAATACATCGGCTGGCAATTTAGCTTTCAGACCGACCCTGTGGATGCCACGATTGCGCTG
ATTTTGGTCTCAGTCTGGAAACAGGTTTCGGTCAACTTCCTCTATTTTCTGGCAGGTTTGCAGTCAATTTCCTACGCGGT
ACGCGAAGCGGCGCTGCTCGATTGCCAAAGCGACAGCAAACGCTTTTGGAGCATCACCTTTCCGCTGCTCGCCCCGACGG
GATTTTTCCTGTTGGTGATCAACCTCACTTACGCTTTTTTCGACACTTTCGGCGTGATTGACACCATGACCAATGGCGGC
CCCGGCGGCAGTACCACCTCACTGGTGTATAAGGTGTATCGCGACGGTTTTGTTGGTGCAGACCTTGGCGGCAGCTCGGC
GCAATCGGTGGTGTTACTCGTGTTAGTGCTGGCGCTGACTTGGTTGCAATTCCGTTTTGTTGAAAAACGTGTTCATTACT
AA

Upstream 100 bases:

>100_bases
TCGCTTTGCTCGTACCGTGCAATAACCCCAAACGCCGCCAGCATTATCCTGAGATTTTGCTGGCGGCTTGTTATTTTTAC
TGTCTAATTTGAGTTTTCCT

Downstream 100 bases:

>100_bases
GGAGTTACGATGAAAAGTAATCGACTCTCCGATCATTTGATCCTTATCGCTGGCGCACTGTTTATGCTAGTGCCGCTGTG
GCTGATTTTCGCAAGCTCAA

Product: glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQRRQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSLGFTLLFSVI
VSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIAL
ILVSVWKQVSVNFLYFLAGLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGG
PGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRVHY

Sequences:

>Translated_293_residues
MQRRQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSLGFTLLFSVI
VSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIAL
ILVSVWKQVSVNFLYFLAGLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGG
PGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRVHY
>Mature_293_residues
MQRRQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSLGFTLLFSVI
VSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIAL
ILVSVWKQVSVNFLYFLAGLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGG
PGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRVHY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=47.2413793103448, Blast_Score=241, Evalue=5e-65,
Organism=Escherichia coli, GI1790465, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32651; Mature: 32651

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECEEE
LFSSTDYLDSLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHH
AGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGG
HHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRVHY
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRRQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECEEE
LFSSTDYLDSLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHH
AGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGL
HHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGG
HHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRVHY
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]