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The map label for this gene is 227081698

Identifier: 227081698

GI number: 227081698

Start: 1603865

End: 1605043

Strand: Reverse

Name: 227081698

Synonym: VCM66_1484

Alternate gene names: NA

Gene position: 1605043-1603865 (Counterclockwise)

Preceding gene: 227081699

Following gene: 227081697

Centisome position: 55.49

GC content: 48.35

Gene sequence:

>1179_bases
ATGAAACGACGAATCTTAAGTTATCTCTTGCTCTCTTGCCTATCCGTGACGACTTACGCCGCGGAGCTGACACCGTACAC
GGCCAGTAAAGTGGTGAAAGCGAATCAGCTAGCACAAGAGAATAAGGTGAAAGAAGCGATTCAGATCCTAAAACAAGCAG
AACTCAGCCGCAGTTATGATCGCGCTTATGTGGCGCGTATGCTTGGGGTGTTTTATTGGCAGAATGAGCAAATCCCTGCG
GCGATAGCATCCTTGAAGTTGGCGGTAGAGAGCAACGAGTTACAAGATGATCAAGCGTGGACAACACGCAAAATGTTGGC
GGATCTTTTGATAAGCCAACAAGAGTATCGTTCAGCACTCAAACATTACTACACGCTAGCGCAAGCCATTCCCGCCGATC
AAAAAGGGAATGAACTCTGGCTGCGCATTAGTCAGTTGCACTTCCAAATGCAAGAGTGGAAGGCGGTACTGAATGGGATG
CAACAGTATGCTCAGTTCCAAACCAAGGATGCGGTATTGCCACTTTCACTACAATTAGGCGCACAGCTTAATTTGGAACA
GTGGAAGCCGGGAATTCTCACCCTAAAACGCTTATTGGTGTTGGAGCCACAGAAAACCGAGTGGTGGCGTCAGTTAGTGA
GCCTAGAGTTGCGAGTTGGCCAGAAGAAAGAGGCGCTCAGCACACTGGCATTGGCGAAGATGCAAAAAGTGGCACTTAAC
CAACAAGATTTGCGTTTGCTTGCTCAGCTCTATGCGCAAAATGGCATTCCAGAGCGTGCTGCACAAGTGATGGAAAGCCT
AGATGAGGCACAGAGCAATCAACAGCTTATTACTGAGCGAGCCATCTACTGGCAACGTGCGAAAGAGTGGGATAAAGCGA
TCGCTACGTGGCGTTTAGCGGCGACAAAAGATGCCAAATATCACTGGCATGTCGCACAGTTATTGCTGCAAGAGGGCCAT
TATCAACAAGCACTTGCTGAACTGGATCAGGTCAAAGAGCGTGATAAACAAGCGCAAGTCGCTTTAGCGAAAACGCGTGC
TTTGTATAAGCTCAATCAATTTGAGGCCGCATTGGTGCAAGCTAAACGAGCAGACAGCCTCCAATCATCAGAAAGCGCCA
AACAGTGGATCAAATATTTGTCGCAGCAGCGTCAAACTCAATCCACCCAAGACTCGTAG

Upstream 100 bases:

>100_bases
TGCTGGCTCTGCGTAACTGGAAATACCAGCCTAAGATAGTGGATGGTCAACCCGTAAGCCAACCCGGACAAACGGTTCGA
CTGGAGTTTAAACTGAACAA

Downstream 100 bases:

>100_bases
CGATGTTCTAGAGTTCGAGATATACCTTTCCTACTTGAAGTTGCAGCGGTGTTGGCTACGTTCGTTCACCCCAATCACAT
AGTTTGCCTATGCTCATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain Protein; TPR Domain Protein Component Of nB System; TPR Repeat Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein; Short Chain Dehydrogenase

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKRRILSYLLLSCLSVTTYAAELTPYTASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPA
AIASLKLAVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYTLAQAIPADQKGNELWLRISQLHFQMQEWKAVLNGM
QQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKTEWWRQLVSLELRVGQKKEALSTLALAKMQKVALN
QQDLRLLAQLYAQNGIPERAAQVMESLDEAQSNQQLITERAIYWQRAKEWDKAIATWRLAATKDAKYHWHVAQLLLQEGH
YQQALAELDQVKERDKQAQVALAKTRALYKLNQFEAALVQAKRADSLQSSESAKQWIKYLSQQRQTQSTQDS

Sequences:

>Translated_392_residues
MKRRILSYLLLSCLSVTTYAAELTPYTASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPA
AIASLKLAVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYTLAQAIPADQKGNELWLRISQLHFQMQEWKAVLNGM
QQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKTEWWRQLVSLELRVGQKKEALSTLALAKMQKVALN
QQDLRLLAQLYAQNGIPERAAQVMESLDEAQSNQQLITERAIYWQRAKEWDKAIATWRLAATKDAKYHWHVAQLLLQEGH
YQQALAELDQVKERDKQAQVALAKTRALYKLNQFEAALVQAKRADSLQSSESAKQWIKYLSQQRQTQSTQDS
>Mature_392_residues
MKRRILSYLLLSCLSVTTYAAELTPYTASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPA
AIASLKLAVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYTLAQAIPADQKGNELWLRISQLHFQMQEWKAVLNGM
QQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKTEWWRQLVSLELRVGQKKEALSTLALAKMQKVALN
QQDLRLLAQLYAQNGIPERAAQVMESLDEAQSNQQLITERAIYWQRAKEWDKAIATWRLAATKDAKYHWHVAQLLLQEGH
YQQALAELDQVKERDKQAQVALAKTRALYKLNQFEAALVQAKRADSLQSSESAKQWIKYLSQQRQTQSTQDS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45172; Mature: 45172

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRILSYLLLSCLSVTTYAAELTPYTASKVVKANQLAQENKVKEAIQILKQAELSRSYD
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAYVARMLGVFYWQNEQIPAAIASLKLAVESNELQDDQAWTTRKMLADLLISQQEYRSAL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KHYYTLAQAIPADQKGNELWLRISQLHFQMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCC
AQLNLEQWKPGILTLKRLLVLEPQKTEWWRQLVSLELRVGQKKEALSTLALAKMQKVALN
CCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
QQDLRLLAQLYAQNGIPERAAQVMESLDEAQSNQQLITERAIYWQRAKEWDKAIATWRLA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATKDAKYHWHVAQLLLQEGHYQQALAELDQVKERDKQAQVALAKTRALYKLNQFEAALVQ
HCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRADSLQSSESAKQWIKYLSQQRQTQSTQDS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRRILSYLLLSCLSVTTYAAELTPYTASKVVKANQLAQENKVKEAIQILKQAELSRSYD
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAYVARMLGVFYWQNEQIPAAIASLKLAVESNELQDDQAWTTRKMLADLLISQQEYRSAL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KHYYTLAQAIPADQKGNELWLRISQLHFQMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCC
AQLNLEQWKPGILTLKRLLVLEPQKTEWWRQLVSLELRVGQKKEALSTLALAKMQKVALN
CCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
QQDLRLLAQLYAQNGIPERAAQVMESLDEAQSNQQLITERAIYWQRAKEWDKAIATWRLA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATKDAKYHWHVAQLLLQEGHYQQALAELDQVKERDKQAQVALAKTRALYKLNQFEAALVQ
HCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKRADSLQSSESAKQWIKYLSQQRQTQSTQDS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA