| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is yniA [C]
Identifier: 227081694
GI number: 227081694
Start: 1598661
End: 1599527
Strand: Direct
Name: yniA [C]
Synonym: VCM66_1480
Alternate gene names: 227081694
Gene position: 1598661-1599527 (Clockwise)
Preceding gene: 227081692
Following gene: 227081695
Centisome position: 55.27
GC content: 44.87
Gene sequence:
>867_bases ATGTGGCCAGCAATTATTCAACAATTGTCCGAGCAGTTGGGCAAAGATTTTCACCTCGTTGAAAAAGAAAAAGTGCATGG GGGTGACATTAATGAATGCTTTATGGTTAGCGATGGAATAGATCGTTATTTTGTGAAAACAAACCAACGCGAGTATCTGA CCAAATTTACCGCCGAGGTGGAAAACTTGCGTGTGATGCGCGAGTCCAATACCGTTCAAGTACCCGAGTACATTCTGCAC GGCACGAGCAAAACGCATGCTTATCTGGTGCTTAATTATTTAGCGACCAAGCCATTAGATGACGCCGAACGAAGTTACGA ATTTGGGGTGCAACTGGCCAACCTGCATCGCTGGGGAGAGCAAAAAGAGTTTGGCTTCGATATCGATAATTACATTGGAG CGACAGTTCAACCTAACCCTTGGCACAAAAAGTGGGCATTATTTTTTGCAGAGCAGCGTATCGGTTGGCAGCTACAGCTA ATGCAAGAAAAAGGGGTCAACCTCACCAACATCAATGAGTTTGTTGAGATGGTCAAAACTCGTTTGGCCAACCACTCTCC GCGCCCTTCTCTACTGCATGGTGATCTCTGGTTTGGCAATGTCGCCAACATCGTTAATGGCCCCTTGTGCTTTGACCCTG CTTGTTATTGGGGAGATCGCGAGTGTGATATTGCTCTCGCTGAATGGTTTGGTGGTTTTCAACCTGAGTTCTTCCAAGGC TATGAAAGCGTGTGGCCACTCGATTGGGGTTATGAAGAACGAAAAGATATCTACAACCTTTATCATGTACTAAACCACTA TAACCAGTTTGGTGGGCATTATTTGGATGAAGCACAGAAATTGATTGAGAAGATATTGTCTTACTGA
Upstream 100 bases:
>100_bases GCATAGATAAACATTGTGATTGGGATGAACGAACCTAGCCAACACCACTGTAGATTCAAGTTATAGCCAGTATGCAGATC AATAACCGAGAGCTTGAATT
Downstream 100 bases:
>100_bases ATGCTTTAACTGTTACTCATTGATTTTTCTTGGATCATAGCTGCCAGACTTAATTGTTGATTTTATGTTGACCTTCAAAC TTTAGACTTAATTTTACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWPAIIQQLSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRESNTVQVPEYILH GTSKTHAYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQKEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQL MQEKGVNLTNINEFVEMVKTRLANHSPRPSLLHGDLWFGNVANIVNGPLCFDPACYWGDRECDIALAEWFGGFQPEFFQG YESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKILSY
Sequences:
>Translated_288_residues MWPAIIQQLSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRESNTVQVPEYILH GTSKTHAYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQKEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQL MQEKGVNLTNINEFVEMVKTRLANHSPRPSLLHGDLWFGNVANIVNGPLCFDPACYWGDRECDIALAEWFGGFQPEFFQG YESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKILSY >Mature_288_residues MWPAIIQQLSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRESNTVQVPEYILH GTSKTHAYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQKEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQL MQEKGVNLTNINEFVEMVKTRLANHSPRPSLLHGDLWFGNVANIVNGPLCFDPACYWGDRECDIALAEWFGGFQPEFFQG YESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKILSY
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family
Homologues:
Organism=Homo sapiens, GI20149680, Length=289, Percent_Identity=30.4498269896194, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI11545906, Length=290, Percent_Identity=30.6896551724138, Blast_Score=122, Evalue=5e-28, Organism=Escherichia coli, GI1788019, Length=287, Percent_Identity=44.5993031358885, Blast_Score=266, Evalue=8e-73, Organism=Caenorhabditis elegans, GI212659227, Length=182, Percent_Identity=33.5164835164835, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1539_VIBCH (Q9KRU5)
Other databases:
- EMBL: AE003852 - PIR: G82186 - RefSeq: NP_231179.1 - ProteinModelPortal: Q9KRU5 - GeneID: 2613918 - GenomeReviews: AE003852_GR - KEGG: vch:VC1539 - TIGR: VC_1539 - HOGENOM: HBG635091 - OMA: LYNLYHI - ProtClustDB: CLSK874419 - InterPro: IPR016477 - InterPro: IPR011009 - PIRSF: PIRSF006221
Pfam domain/function: PF03881 Fructosamin_kin; SSF56112 Kinase_like
EC number: NA
Molecular weight: Translated: 33770; Mature: 33770
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPAIIQQLSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEV CCHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHH ENLRVMRESNTVQVPEYILHGTSKTHAYLVLNYLATKPLDDAERSYEFGVQLANLHRWGE HHHHHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC QKEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKT CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCHHHHHHHHHH RLANHSPRPSLLHGDLWFGNVANIVNGPLCFDPACYWGDRECDIALAEWFGGFQPEFFQG HHHCCCCCCCEEECCCCCCCHHHHHCCCCEECCCCCCCCCCCCEEHHHHCCCCCCHHHHH YESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKILSY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MWPAIIQQLSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEV CCHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHH ENLRVMRESNTVQVPEYILHGTSKTHAYLVLNYLATKPLDDAERSYEFGVQLANLHRWGE HHHHHHHCCCCEECCHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC QKEFGFDIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKT CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCHHHHHHHHHH RLANHSPRPSLLHGDLWFGNVANIVNGPLCFDPACYWGDRECDIALAEWFGGFQPEFFQG HHHCCCCCCCEEECCCCCCCHHHHHCCCCEECCCCCCCCCCCCEEHHHHCCCCCCHHHHH YESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKILSY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301