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The map label for this gene is tusE [H]

Identifier: 227081527

GI number: 227081527

Start: 1404031

End: 1404360

Strand: Reverse

Name: tusE [H]

Synonym: VCM66_1311

Alternate gene names: 227081527

Gene position: 1404360-1404031 (Counterclockwise)

Preceding gene: 227081528

Following gene: 227081525

Centisome position: 48.55

GC content: 45.15

Gene sequence:

>330_bases
ATGCTGGAATACCAAGGCAAAACTATCGACACTGACGCCCAAGGCTATCTTCTTGACTTTACGCAATGGGAAGAAGGGAT
GATCGCTCTTTTAGCAGAGCAAGAAGGGATTGAACTGACAGATGCCCACTTAGAAGTGGTTCATTTTGTCCGTCGTTTCT
ATGAGGAGTTTAAAACCTCCCCTGCTATTCGTATGTTGGTCAAAGCGATGGAAAAAGAGCACGGCCCAGAAAAAGGCAAC
AGTAAATATCTGTTTAAACTCTTTCCGAAAGGCCCCGCCAAACAAGCAACAAAACTGGCTGGCTTACCAAAACCGGCGAA
GTGCTTATAA

Upstream 100 bases:

>100_bases
TTTACGGTAAGCCCGATGAATTCATCGGGCTTTTTTATGCTTGAGCCACACCTTGAGCTTCGCTACCCTATGCGCAAATT
GACAACCACAGACACTCACC

Downstream 100 bases:

>100_bases
GATTTAAAAACTCCATAGCGAAGTCATCGTATTAGGCTTCGCTTTGACACTCTTCCGACTTAACACTACAGAATTTCAAA
CCCTTGATAGTCATGTTCTA

Product: sulfite reductase, gamma subunit-related protein

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein E [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLEYQGKTIDTDAQGYLLDFTQWEEGMIALLAEQEGIELTDAHLEVVHFVRRFYEEFKTSPAIRMLVKAMEKEHGPEKGN
SKYLFKLFPKGPAKQATKLAGLPKPAKCL

Sequences:

>Translated_109_residues
MLEYQGKTIDTDAQGYLLDFTQWEEGMIALLAEQEGIELTDAHLEVVHFVRRFYEEFKTSPAIRMLVKAMEKEHGPEKGN
SKYLFKLFPKGPAKQATKLAGLPKPAKCL
>Mature_109_residues
MLEYQGKTIDTDAQGYLLDFTQWEEGMIALLAEQEGIELTDAHLEVVHFVRRFYEEFKTSPAIRMLVKAMEKEHGPEKGN
SKYLFKLFPKGPAKQATKLAGLPKPAKCL

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from tusD [H]

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=109, Percent_Identity=64.2201834862385, Blast_Score=151, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: NA

Molecular weight: Translated: 12402; Mature: 12402

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEYQGKTIDTDAQGYLLDFTQWEEGMIALLAEQEGIELTDAHLEVVHFVRRFYEEFKTS
CCCCCCCEECCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
PAIRMLVKAMEKEHGPEKGNSKYLFKLFPKGPAKQATKLAGLPKPAKCL
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLEYQGKTIDTDAQGYLLDFTQWEEGMIALLAEQEGIELTDAHLEVVHFVRRFYEEFKTS
CCCCCCCEECCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
PAIRMLVKAMEKEHGPEKGNSKYLFKLFPKGPAKQATKLAGLPKPAKCL
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA