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The map label for this gene is rhtA [H]

Identifier: 227081482

GI number: 227081482

Start: 1350166

End: 1351044

Strand: Reverse

Name: rhtA [H]

Synonym: VCM66_1266

Alternate gene names: 227081482

Gene position: 1351044-1350166 (Counterclockwise)

Preceding gene: 227081483

Following gene: 227081474

Centisome position: 46.71

GC content: 50.97

Gene sequence:

>879_bases
ATGCCAACAATAAAATCTCCTTTACTCATTGCTATTCTTAGCTTGCTCGCCGCTATGATCACCATCCAATCCGGAGCATC
GATTGCGAAACAGTTGTTTCCACTGGTCGGCCCGGGCGGTACCGTAGCGCTACGCATCAGCCTCTCTGCGCTGATTTTAA
TGCTGATTTTCCGCCCTTGGCGTGCACGCCTCAGCTGGCCACAATGGCGCTCTATGTGCATTTATGGTGCAAGTTTGGGT
GGGATGCAGCTGAGTTTTTACTTCGCTATCGAACGTATTCCACTGGGTATTGGGGTAGCGTTAGAATTTTCAGGCCCACT
GCTGCTCGCCTTACTCTCCTCTAAGCGTAAGAAAGATCTGATATGGGTTGCGTTGGCTATTCTTGGTATTGTGTTCTTAT
TACCGGATATGAACGGCGTTGATGCGTTAGATCCAATTGGCGTTGCGCTCGCATTAATTGCTGGCGGTTTTTGGGCTGGC
TACATCTGGTTCGGACAACGTGCTGGCAGCGTAGGCTCAGGCGGTATGACGGTTTCGATTGGGATGCTGGTTGCCGCAGT
CATCTATTTCCCAATCGCCACTCAATTGGCCGAAGCCTCGATTTTTAGCTGGTCGATTCTGCCGATGGCACTGCTGGTCG
CCGTAATGTCGAGTGCCCTACCTTATAGCCTTGAGATGGTGGCACTCAGCCGACTCTCTACACAGCATTTCAGTGTATTA
ATGAGCTTAGAGCCTGCGATTGCCGCGATGGCGGGGTTAGCCATTTTGGGTGAAACTCTACAATGGAGCCAGTGGCTGGC
GATTTTTATGATCATTACTGCGTCCATGGGCTCTACCCTGTCCGCGGCGAAATCACCGACTAAAGTGACTCAAGAGTAA

Upstream 100 bases:

>100_bases
AGAAACCACCCAATCGAGGTGGGCGCATACGCCCACCTATCTCCACAGACCTTTTTACGGCATAATCTCTTCGCACTTTC
TGCTGAGTTTTTCATTATTT

Downstream 100 bases:

>100_bases
AAGCACCGCGGTCAATCATAGGAAAGAAAGAAATAAGAAGAGAAAAATCCGGCCGAAGCCGGATTTTTTATGGGCGCTGC
CCGAATTTTACTTTGCCTTC

Product: putative Inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MPTIKSPLLIAILSLLAAMITIQSGASIAKQLFPLVGPGGTVALRISLSALILMLIFRPWRARLSWPQWRSMCIYGASLG
GMQLSFYFAIERIPLGIGVALEFSGPLLLALLSSKRKKDLIWVALAILGIVFLLPDMNGVDALDPIGVALALIAGGFWAG
YIWFGQRAGSVGSGGMTVSIGMLVAAVIYFPIATQLAEASIFSWSILPMALLVAVMSSALPYSLEMVALSRLSTQHFSVL
MSLEPAIAAMAGLAILGETLQWSQWLAIFMIITASMGSTLSAAKSPTKVTQE

Sequences:

>Translated_292_residues
MPTIKSPLLIAILSLLAAMITIQSGASIAKQLFPLVGPGGTVALRISLSALILMLIFRPWRARLSWPQWRSMCIYGASLG
GMQLSFYFAIERIPLGIGVALEFSGPLLLALLSSKRKKDLIWVALAILGIVFLLPDMNGVDALDPIGVALALIAGGFWAG
YIWFGQRAGSVGSGGMTVSIGMLVAAVIYFPIATQLAEASIFSWSILPMALLVAVMSSALPYSLEMVALSRLSTQHFSVL
MSLEPAIAAMAGLAILGETLQWSQWLAIFMIITASMGSTLSAAKSPTKVTQE
>Mature_291_residues
PTIKSPLLIAILSLLAAMITIQSGASIAKQLFPLVGPGGTVALRISLSALILMLIFRPWRARLSWPQWRSMCIYGASLGG
MQLSFYFAIERIPLGIGVALEFSGPLLLALLSSKRKKDLIWVALAILGIVFLLPDMNGVDALDPIGVALALIAGGFWAGY
IWFGQRAGSVGSGGMTVSIGMLVAAVIYFPIATQLAEASIFSWSILPMALLVAVMSSALPYSLEMVALSRLSTQHFSVLM
SLEPAIAAMAGLAILGETLQWSQWLAIFMIITASMGSTLSAAKSPTKVTQE

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=287, Percent_Identity=52.6132404181185, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31016; Mature: 30885

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIKSPLLIAILSLLAAMITIQSGASIAKQLFPLVGPGGTVALRISLSALILMLIFRPW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
RARLSWPQWRSMCIYGASLGGMQLSFYFAIERIPLGIGVALEFSGPLLLALLSSKRKKDL
HHCCCCHHHHHEEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHHHHCCCHHHH
IWVALAILGIVFLLPDMNGVDALDPIGVALALIAGGFWAGYIWFGQRAGSVGSGGMTVSI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
GMLVAAVIYFPIATQLAEASIFSWSILPMALLVAVMSSALPYSLEMVALSRLSTQHFSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MSLEPAIAAMAGLAILGETLQWSQWLAIFMIITASMGSTLSAAKSPTKVTQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
PTIKSPLLIAILSLLAAMITIQSGASIAKQLFPLVGPGGTVALRISLSALILMLIFRPW
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
RARLSWPQWRSMCIYGASLGGMQLSFYFAIERIPLGIGVALEFSGPLLLALLSSKRKKDL
HHCCCCHHHHHEEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHHHHCCCHHHH
IWVALAILGIVFLLPDMNGVDALDPIGVALALIAGGFWAGYIWFGQRAGSVGSGGMTVSI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
GMLVAAVIYFPIATQLAEASIFSWSILPMALLVAVMSSALPYSLEMVALSRLSTQHFSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MSLEPAIAAMAGLAILGETLQWSQWLAIFMIITASMGSTLSAAKSPTKVTQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]