Click here to switch to the map view.

The map label for this gene is 227081439

Identifier: 227081439

GI number: 227081439

Start: 1299144

End: 1300226

Strand: Direct

Name: 227081439

Synonym: VCM66_1222

Alternate gene names: NA

Gene position: 1299144-1300226 (Clockwise)

Preceding gene: 227081438

Following gene: 227081440

Centisome position: 44.91

GC content: 53.0

Gene sequence:

>1083_bases
ATGCAACCGATGGTGACTGATGCAACACGTCGCCACTTATTGCAAGTGGCGCTTTTTGGCTGCACGACACCTTGGCTAAT
CAGCGGTTGTAGCTCTGCGCGATCGCCCCAGCCAGCCTTGATTGGCTGTGCAATAGAAGGGCGAGAACGCTTTAGTGTAG
TGATGGCAGATAACGCTGGGCAGGCGGTTGGTAAGCTTGCCTTACCTGCTCGAGGGCATGGTATTGCCATTCACCCAACG
TTGCCGCATGCGGTGGCTTTTGCACGCCGCCCCGGTCAGTTTATGTCGGTGTTTGATTATCAAACGGCTCAGCAAATTGT
GCTGCGTCCCGCCGATACGCAGCGTCACTACTACGGACATGGTGTCTATTCACATGATGGCCGCTACTTATATGCCACGG
AAGGGGGGCAGAAAACCAGTCGTGGTGTGATTGGCGTTTATGATGTGACTCACCACTATCAAAAAGTCGCGGAATGGAGC
GGTTTTGGGATTGGTCCTCACGAAGTGATCTTGATGGCCGATGGTCGTTTGGTTGTGGGGGTTGGTGGCGTCCACACTTT
TGGCCGTGAGCCGTTAAATCTAGAGAGTATGCAGCCAAGTTTGACTTACCTCTCAGCGCAAGGTGAGGTACTGGAGCAAA
TCACTTTACCTGATCGCCATCTGAGCATCCGTCATTTGGCTCATGATGGGGATAACACAGTCCTGTGTGGTCAGCAATAT
CGCGGCCAGCCAGACGATTATCCTCCCTTAGTTGCCATGCACACGGGGACTGGTCCGCTTAAGCCATTACAAGCAGAGCC
TGAGCAGTGGGCGCGTTTTAATCACTATATTGCCAGTATTGCGGCGACCGATGAGTGGATTCTTGCCACCTCTCCCCCCG
GGAATTGCTATGGGATCTGGTCAAAAGCCACGGGCGAATTGGTGGAATTAGCCGCTTTAGCCGATGCTTCCGGCGTGGTT
GTTCGCCATGGTGCTTTTCAAATCAGTTCGGGGTCGGGCAAAATCATTTTGCAATCTGCACCTGAGCTCTCGCAATCGCA
TATGAGCAATGTGATGTGGGACAACCATTGGTCAGCGATCTAG

Upstream 100 bases:

>100_bases
GGGTATCGCGAGGGTTTAGTTTTGCGCGACAAGCTCGAGCAACTGAACTATTTGCTGCACGACGAAGTGGCTGTGGGACT
CGGTGTGGTCATAGGGTTTA

Downstream 100 bases:

>100_bases
GCATAACCCTCCTACTTGATGTGGCAGCGGCGTTGGCCACGTTTGTTCACCCCATAGTCTCTCTGGGCTTATGGGGATGA
ACGTACTTGCCGCCGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MQPMVTDATRRHLLQVALFGCTTPWLISGCSSARSPQPALIGCAIEGRERFSVVMADNAGQAVGKLALPARGHGIAIHPT
LPHAVAFARRPGQFMSVFDYQTAQQIVLRPADTQRHYYGHGVYSHDGRYLYATEGGQKTSRGVIGVYDVTHHYQKVAEWS
GFGIGPHEVILMADGRLVVGVGGVHTFGREPLNLESMQPSLTYLSAQGEVLEQITLPDRHLSIRHLAHDGDNTVLCGQQY
RGQPDDYPPLVAMHTGTGPLKPLQAEPEQWARFNHYIASIAATDEWILATSPPGNCYGIWSKATGELVELAALADASGVV
VRHGAFQISSGSGKIILQSAPELSQSHMSNVMWDNHWSAI

Sequences:

>Translated_360_residues
MQPMVTDATRRHLLQVALFGCTTPWLISGCSSARSPQPALIGCAIEGRERFSVVMADNAGQAVGKLALPARGHGIAIHPT
LPHAVAFARRPGQFMSVFDYQTAQQIVLRPADTQRHYYGHGVYSHDGRYLYATEGGQKTSRGVIGVYDVTHHYQKVAEWS
GFGIGPHEVILMADGRLVVGVGGVHTFGREPLNLESMQPSLTYLSAQGEVLEQITLPDRHLSIRHLAHDGDNTVLCGQQY
RGQPDDYPPLVAMHTGTGPLKPLQAEPEQWARFNHYIASIAATDEWILATSPPGNCYGIWSKATGELVELAALADASGVV
VRHGAFQISSGSGKIILQSAPELSQSHMSNVMWDNHWSAI
>Mature_360_residues
MQPMVTDATRRHLLQVALFGCTTPWLISGCSSARSPQPALIGCAIEGRERFSVVMADNAGQAVGKLALPARGHGIAIHPT
LPHAVAFARRPGQFMSVFDYQTAQQIVLRPADTQRHYYGHGVYSHDGRYLYATEGGQKTSRGVIGVYDVTHHYQKVAEWS
GFGIGPHEVILMADGRLVVGVGGVHTFGREPLNLESMQPSLTYLSAQGEVLEQITLPDRHLSIRHLAHDGDNTVLCGQQY
RGQPDDYPPLVAMHTGTGPLKPLQAEPEQWARFNHYIASIAATDEWILATSPPGNCYGIWSKATGELVELAALADASGVV
VRHGAFQISSGSGKIILQSAPELSQSHMSNVMWDNHWSAI

Specific function: Unknown

COG id: COG3490

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39114; Mature: 39114

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPMVTDATRRHLLQVALFGCTTPWLISGCSSARSPQPALIGCAIEGRERFSVVMADNAG
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCC
QAVGKLALPARGHGIAIHPTLPHAVAFARRPGQFMSVFDYQTAQQIVLRPADTQRHYYGH
CHHHEEECCCCCCCEEECCCCCHHHHHHCCCCCCEEEHHHHCCHHEEECCCCCCCEEEEC
GVYSHDGRYLYATEGGQKTSRGVIGVYDVTHHYQKVAEWSGFGIGPHEVILMADGRLVVG
CEEECCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEE
VGGVHTFGREPLNLESMQPSLTYLSAQGEVLEQITLPDRHLSIRHLAHDGDNTVLCGQQY
ECCCHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEECHHH
RGQPDDYPPLVAMHTGTGPLKPLQAEPEQWARFNHYIASIAATDEWILATSPPGNCYGIW
CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEC
SKATGELVELAALADASGVVVRHGAFQISSGSGKIILQSAPELSQSHMSNVMWDNHWSAI
CCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQPMVTDATRRHLLQVALFGCTTPWLISGCSSARSPQPALIGCAIEGRERFSVVMADNAG
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCC
QAVGKLALPARGHGIAIHPTLPHAVAFARRPGQFMSVFDYQTAQQIVLRPADTQRHYYGH
CHHHEEECCCCCCCEEECCCCCHHHHHHCCCCCCEEEHHHHCCHHEEECCCCCCCEEEEC
GVYSHDGRYLYATEGGQKTSRGVIGVYDVTHHYQKVAEWSGFGIGPHEVILMADGRLVVG
CEEECCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEE
VGGVHTFGREPLNLESMQPSLTYLSAQGEVLEQITLPDRHLSIRHLAHDGDNTVLCGQQY
ECCCHHCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEECHHH
RGQPDDYPPLVAMHTGTGPLKPLQAEPEQWARFNHYIASIAATDEWILATSPPGNCYGIW
CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEC
SKATGELVELAALADASGVVVRHGAFQISSGSGKIILQSAPELSQSHMSNVMWDNHWSAI
CCCCCHHHHHHHHCCCCCEEEECCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA