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The map label for this gene is mcp4 [H]

Identifier: 227081420

GI number: 227081420

Start: 1276685

End: 1278295

Strand: Reverse

Name: mcp4 [H]

Synonym: VCM66_1203

Alternate gene names: 227081420

Gene position: 1278295-1276685 (Counterclockwise)

Preceding gene: 227081421

Following gene: 227081419

Centisome position: 44.19

GC content: 50.47

Gene sequence:

>1611_bases
ATGTTGAAGCTAGAGAATATCAAGGTCAGTTATAAACTGGCCGCTATTGTCATCGTCGGTATTGTTGGATTTTTGAGCCT
GCTCTTTATCTCTGCCAATGCCCTAAAAGAAAACTTGGTTGCTGAGCGTGAAGCACGTTTGAAAGCAGTGATTCAAAGCA
CCCTATCTCAGGTGGCTTATCTCAACCAAACCCTACCCAAAGAACAAGCGCAAGAGCAAGCCAAAGCCCTGATTAACGCG
CTACGATTTGATGGCAACAACTACATGTTCGTGATTGATGAATCACGCTACACAGTGGTACACCCGATCCGTCAGGATCT
GGTTGGTCAACAGATGGGGAATCCGGGTAAAGATACAGAAGGTCAATTCTGGTTCACCATGATCGACTTAGCGCGCAATG
GTCAACAAGGCTCGTTGATCTACCCTTGGAAAAATCAACAAGGCAACCCTGCCGATAAACTCTCGTTCGTCAATGGCTTT
GCGCCTTGGGGATGGATTTTAGGCTCAGGCATGTTGTTGGACGATATTGAACACGCGGTTTACCAACAGTTCCTCAGAAT
GGGGTTCGCCACCCTCATAGTGACGCTCGTTATGATAGGTCTGGGTGTTGTGATCAGTCGTGCGGTGATTCAACCACTCG
ATACCATCAAAGATGTGATGAAAAAAGTTGCCCAAGGCGATCTCACCGCACAGATTCCTGTGCTGGGTAAAGATGAGCTT
GGTATTGTTGCCCAGCGCATCAATAACAGTATTGCCGCCGTACATGATGCCTTGGTTGAATCCGTACAGTCCGCCTCTTC
TGTCGCGGAAGCGGCGATCCGCATCGCCTCCTCTGCAGAAGAAACCAGCCAAGCCGTGGTCTCACAACGTGACCAATTAA
GCCAACTTGCCACCGCGATGAACCAGATGACCGCGACCGTGGCTGATGTGGCAGGCCATGCAGAAGACACCGCGCGCGAT
ACCCTCGATGCCAGCAAAGAAGCGAACCTAGGAGATAAGGACGTCCATTCGAGCGTAGACAGCATTCGCGCCTTATCGGT
TGAACTGGGCGTTGCAACTGATCAAGTGAATAAGCTCAAAGAAGGGGTGATGCAAATTAGCGAAGTCACCTCGGTCATCA
GTGGCATTTCCGAACAAACGAACCTTCTTGCTTTAAATGCGGCGATTGAAGCGGCGCGAGCGGGCGATCAAGGTCGCGGC
TTCGCTGTGGTCGCCGACGAGGTACGGAATTTAGCCAGCCGAACTCATCATTCCACCGATGAAATCCAAACCATGATTAA
CCGTCTGCAACAACTGGCGGTAAGCACAGCCAGTGCGATGCAAAAAAGCCAAGCATTGGCGGCTAACAGCGTGGCAACCG
CAGAAAATGCGGGCAGCGACTTATCTCTGATTGTGAATCACATTCAGCACGTCAGCGACAAAGCCACTCAGATTGCCACC
GCAGCGGAAGAACAAAGTGCCGTTGCCGAAGAGATGAACCGTAACGTAAGTGGCATTAATGATGCGGCGCTGGAAATGTC
GCAAGCGGCCACTTATTTAGCAGAAGAGAGTGAAAAACTGGCTGACTTGTCACGGCAACTCGACCAAAAACTGACGGCCT
TTAAACTGTGA

Upstream 100 bases:

>100_bases
GAACCATCCTTTTATTAGTCCTTATCGGCCTATTCATTCAAACAATAACCTAGCCGAATAAGACCATAAACATTACAGCG
CTCAGTTAGGTGGTAACGTC

Downstream 100 bases:

>100_bases
CCTCACTCTTTTTATGAGCAGACAGAGATCGGCATGGGCATTCTTCGATGAAAGTGCTACCCTTACGGCATTATCTACTG
CGAGAGAATAAAATGAGCAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQTLPKEQAQEQAKALINA
LRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGF
APWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL
GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARD
TLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRG
FAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIAT
AAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL

Sequences:

>Translated_536_residues
MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQTLPKEQAQEQAKALINA
LRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGF
APWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL
GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARD
TLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRG
FAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIAT
AAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL
>Mature_536_residues
MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQTLPKEQAQEQAKALINA
LRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGF
APWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL
GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARD
TLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRG
FAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIAT
AAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=311, Percent_Identity=32.1543408360129, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787690, Length=345, Percent_Identity=32.1739130434783, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=31.5789473684211, Blast_Score=125, Evalue=9e-30,
Organism=Escherichia coli, GI1788194, Length=354, Percent_Identity=30.225988700565, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789453, Length=349, Percent_Identity=27.5071633237822, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57633; Mature: 57633

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAY
CCEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNQTLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTE
HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCC
GQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAV
CCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
YQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLK
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTD
HHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHH
EIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAY
CCEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNQTLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTE
HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCC
GQFWFTMIDLARNGQQGSLIYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAV
CCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
YQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
GIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLK
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTD
HHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHH
EIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]