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The map label for this gene is 227081323

Identifier: 227081323

GI number: 227081323

Start: 1179512

End: 1180117

Strand: Reverse

Name: 227081323

Synonym: VCM66_1106

Alternate gene names: NA

Gene position: 1180117-1179512 (Counterclockwise)

Preceding gene: 227081324

Following gene: 227081322

Centisome position: 40.8

GC content: 46.04

Gene sequence:

>606_bases
TTGGGTAGAACAATTCTCTTCGGGTTAGGGGTTAAGGTTTATCTCAATGAAGTCCCATCAAGAACGACTAAAAATAACAA
TTCAAAAGGAAAGATTATGAAACGCCTGAGCACTGTTTTACTGATGTCGGTCGTCTCCGCTTCAGCCTATGCGGATAACA
CCTGCTTCAGCCAAAAATACGATGCCTACATCGATGCTTCATTGAACTGGTATGCCGATCTCACCAAACTGACCAGTGAA
CGTAACCCAGATTTAGCCGAAGTGAGTCAATGGTTTTTAGAAGGAAGGCAGCACCACTTTGCCTTGAATCGCGCGGCTGT
TCATTACTACTTACAACATGACCCAAGTAAAGTCGCAACCACCCAACATGTTGAATCATGGTTAAAACTAGAACAGCCAG
AAATCAAACAATTGGCGACACGCAGCGATGAGCTTGGCAAGTTAGCCAGCGTAACCTTTGCCGACCGACAAGCCACACCT
CACCCGAAAAATTATGAACTGCGCTCCGCGTTGGCAGACCTGCTCAGTCACCCTAAGCAGATCGAATCGGCGCTGAATCG
CTATAATCAGGCGATTGAAAAAGTCGAAGCGATGAAGTGCCAATAA

Upstream 100 bases:

>100_bases
CAAGCTAGATCGCAGGATTTCCCTCTGAGCTCGTTTACAATGTTTCGCCTTGAGATTTACAATTTAGTAAACAATATTTT
AACCTAACGCCCCTAAATGA

Downstream 100 bases:

>100_bases
TCACACACCAATGCAATCAAGGCTTTCCGAATTAAGACGGGACATTGTTCCCGTTTTGAATTAGATTGTCCCGCTTGAAG
CCCATCAATCAGAATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSE
RNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATP
HPKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ

Sequences:

>Translated_201_residues
MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSE
RNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATP
HPKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ
>Mature_200_residues
GRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSER
NPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPH
PKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22815; Mature: 22684

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKY
CCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
DAYIDASLNWYADLTKLTSERNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVAT
CCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
TQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPHPKNYELRSALADLLSHPKQ
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCHHH
IESALNRYNQAIEKVEAMKCQ
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKY
CCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
DAYIDASLNWYADLTKLTSERNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVAT
CCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
TQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPHPKNYELRSALADLLSHPKQ
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCHHH
IESALNRYNQAIEKVEAMKCQ
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA