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The map label for this gene is 227081298

Identifier: 227081298

GI number: 227081298

Start: 1150187

End: 1150714

Strand: Direct

Name: 227081298

Synonym: VCM66_1081

Alternate gene names: NA

Gene position: 1150187-1150714 (Clockwise)

Preceding gene: 227081297

Following gene: 227081302

Centisome position: 39.76

GC content: 45.45

Gene sequence:

>528_bases
ATGAGATTGGCTAAATGTTGGCTATTACTGCTCTGTATCTGGCTTAGTGGATGTTCGGCAGAGATTGATGATTATCGTGC
GACGACGCCTAAGTTTGATCTCTTCAATTACTTTGTCGGAACGACACATGCGTGGGGTATGGTGCAAGACTATACCGAGA
AGCAGACGCGCCGTTTTGAGGTGGTAATTGAAGGTCGGATTGAGAATAACCAACTGATTTTAGTCGAAGACTTCGTGTTT
GATGATGGGGAAAAGGATCAACGGATCTGGACGATTAACCGAACGGCTGATGATGCGTACGAAGGACGAGCGGATGACAT
TGTTGGAACGGCTCGCGGTAAAGAAGTGGGTAATGCACTGCAGTGGCAATACGATTTTGTGTTGAAACTCGACAGCGGCG
ATGTGCAAGTACACTTCGATGACTGGCTGTATCGACAAGATGACAAGCGGGTATTTAATTTAACCAAAATTCGCAAATTT
GGTCTTGAAGTCGGTCGGATTACTCTGTTTTTTGAAAAGCAGGAGTGA

Upstream 100 bases:

>100_bases
TTGATGATGAAGCGTTTAATGATGCTTTTCTCTCCATTTGGCTGTCGCCGCAAACGGAATATTTAACCTTGCGTAATCAA
TTGATAGGAATGAATCGACC

Downstream 100 bases:

>100_bases
AACGGTCTGGTATAAACCAAGTCGATAAGTCGTCGATAAGTAAAAGGGGAGCCGTTGCTCCCCTTAGTCATTTGGTCTCT
CTTGTCGAGATTACAGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein; GABA Permease

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRLAKCWLLLLCIWLSGCSAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFEVVIEGRIENNQLILVEDFVF
DDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNALQWQYDFVLKLDSGDVQVHFDDWLYRQDDKRVFNLTKIRKF
GLEVGRITLFFEKQE

Sequences:

>Translated_175_residues
MRLAKCWLLLLCIWLSGCSAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFEVVIEGRIENNQLILVEDFVF
DDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNALQWQYDFVLKLDSGDVQVHFDDWLYRQDDKRVFNLTKIRKF
GLEVGRITLFFEKQE
>Mature_175_residues
MRLAKCWLLLLCIWLSGCSAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFEVVIEGRIENNQLILVEDFVF
DDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNALQWQYDFVLKLDSGDVQVHFDDWLYRQDDKRVFNLTKIRKF
GLEVGRITLFFEKQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20638; Mature: 20638

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAKCWLLLLCIWLSGCSAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCEEEE
VVIEGRIENNQLILVEDFVFDDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNAL
EEEEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCHHCCEE
QWQYDFVLKLDSGDVQVHFDDWLYRQDDKRVFNLTKIRKFGLEVGRITLFFEKQE
EEEEEEEEEECCCCEEEEECCCEEECCCCHHHHHHHHHHHCCEEEEEEEEEEECC
>Mature Secondary Structure
MRLAKCWLLLLCIWLSGCSAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCEEEE
VVIEGRIENNQLILVEDFVFDDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNAL
EEEEEEECCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCHHCCEE
QWQYDFVLKLDSGDVQVHFDDWLYRQDDKRVFNLTKIRKFGLEVGRITLFFEKQE
EEEEEEEEEECCCCEEEEECCCEEECCCCHHHHHHHHHHHCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA