| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ybeL [H]
Identifier: 227081131
GI number: 227081131
Start: 978949
End: 979419
Strand: Direct
Name: ybeL [H]
Synonym: VCM66_0913
Alternate gene names: 227081131
Gene position: 978949-979419 (Clockwise)
Preceding gene: 227081120
Following gene: 227081137
Centisome position: 33.84
GC content: 46.07
Gene sequence:
>471_bases ATGCCAAAACAGAAAGCAAGTTATGAAGCCTTACTGGAAGAGGTAGTGGAAACACTCAAACACAGCCCAGATGGCGTGAA TGAGATCGTTGAATCCTCTGCGAAATACGTCGATGCGGCGAATGATTTGACAAAGGATGAGCTTGCGCTGATCTCCGCTT ATGTAAAAGCTGACCTTAAAGAGTTCTCGCAAAGTTTTGAGCAAAGCAAAAGCAGCCCATTCTATCTGATGATCACCAAT TCCATCTGGCAGGGACTACTGGATATTACCGACCGCACCAAAGTGGAATGGGTCGAGCTGTTTGCTGATTTAGAACACCA AGGCTTGTATCAGGCGGGAGATATGATTGGTTTGGGCGTGTTGATCTGTGATCAGTGCGGTCATAAAACCGAATTTAATC ACCCAACGGAAATTGAACCTTGTTCGCAATGTGGCGGTAAAGCGTTTAGCCGCCAACCACTGAAACCTTAG
Upstream 100 bases:
>100_bases TCAGTAGGAACGAAGTCTTTCGGTTCGGCATAGAATACAGAAAGCAGGGGGTTACAACAATAGCTAATCCGGCAGCCATC AGGCTTGAGAGAGGTGAGAG
Downstream 100 bases:
>100_bases TTGGATAAAGCGCTGCAATAAAAAACGGGAAGATAACTTCCCGTTTTGTTTTTACTTATCTAGCCCGGCGCTGGCGCCAG AAAGCGAACCCAGCCGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPKQKASYEALLEEVVETLKHSPDGVNEIVESSAKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITN SIWQGLLDITDRTKVEWVELFADLEHQGLYQAGDMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP
Sequences:
>Translated_156_residues MPKQKASYEALLEEVVETLKHSPDGVNEIVESSAKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITN SIWQGLLDITDRTKVEWVELFADLEHQGLYQAGDMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP >Mature_155_residues PKQKASYEALLEEVVETLKHSPDGVNEIVESSAKYVDAANDLTKDELALISAYVKADLKEFSQSFEQSKSSPFYLMITNS IWQGLLDITDRTKVEWVELFADLEHQGLYQAGDMIGLGVLICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=35, Blast_Score=117, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 17415; Mature: 17284
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQKASYEALLEEVVETLKHSPDGVNEIVESSAKYVDAANDLTKDELALISAYVKADLK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFSQSFEQSKSSPFYLMITNSIWQGLLDITDRTKVEWVELFADLEHQGLYQAGDMIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH LICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP HHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure PKQKASYEALLEEVVETLKHSPDGVNEIVESSAKYVDAANDLTKDELALISAYVKADLK CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFSQSFEQSKSSPFYLMITNSIWQGLLDITDRTKVEWVELFADLEHQGLYQAGDMIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH LICDQCGHKTEFNHPTEIEPCSQCGGKAFSRQPLKP HHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]