Click here to switch to the map view.

The map label for this gene is 227081062

Identifier: 227081062

GI number: 227081062

Start: 902705

End: 903742

Strand: Reverse

Name: 227081062

Synonym: VCM66_0843

Alternate gene names: NA

Gene position: 903742-902705 (Counterclockwise)

Preceding gene: 227081065

Following gene: 227081061

Centisome position: 31.24

GC content: 50.96

Gene sequence:

>1038_bases
ATGGACACTATTCGTACCCTCACGGCTCTGCTGCAAAATAGCGGCTGCCAGTACCAAATTTTTGATCTCGGACGCCGCGT
GCAAGCGATGGATAACCGCCAATTTGCTCAAGTGGAGTTAGGTCAACAAGCTTACCCGTTTCCGCTACAACGTCATGCAC
AATTCGCTATCGTGTATTGGAATGAACAGCGTCAACCTTGGATCTGGATGCTCAAATTTGCACTTGATGAACGTGGCTTA
CTGCAACAAGCCGATGTTGGGCAATTTATTCAATATCTGCTCGAAGCAATGGGCAGCCGACTCCATCAATCTTTGACGGA
AGAGCAGCAACAGAAGCTCGCCAATAATCCTTACACTTTCAAACCCAGTGAAGACAAACTCGCGATGCTGCATAGCCATA
TTCGCATGCAGCTTGGTCTAGCCTGCAGCCAATACTACGAACACGCTCAGCACTATTTTTCAGGCGGTTTAGGCTGGGAT
AAGTGGCATACGGTGGGTTTGCAAGGGATTACCGATCTTTGTGCCCGTTTAGAGCAAGAACAAAACGGCGTATTGCTCCG
TAAAGCCCTGACTCATTTGCCTGCCCAGCCACTTTACGCTGTGCTCGGGGCATTAGAGCATGTCACCTTACCGGAAAAAC
TGGCGAAACGCTTAAGTGAGCTTGCGGAGGCGGAAGTCAAAGCCAGCGATCCAGATCTGTTTTTGCTCGCGGCTCTAGTG
AGAGCCTTGGCCGGAGCGCCTGCCAATATCCTTGATGCGACTTGCGATGCGATTCTCGCCTCTCCCGCAATTTGCCATCC
AGAAGTGCTGATTGCGCTTGCAGGACGCAGTTGGATGAGCTTAGAAAATAGCGGCCGTGCGCAACGCTTTTTGATCCGCT
TAGCGCAAACTCAAAATCAACCCTTATTTAATCAATTGTTCGCGGACGTGGTCATGCTGCCCGCACTACGGGGAGTGATG
CTGCCTCTATTGCACGCCAGCCCATCACCAGAGTTGGCGCAGGCTCTAGAGCAGTTACAGCAGATGACACGAGGATAA

Upstream 100 bases:

>100_bases
GTTGAACTGCATAATTCGTCCGGTTTATTTCTATGATGACCTTGAAAAAGTGCCATAGAGTACCATTTATTGGAGAAAGA
AAGTTAGGATCAATTTCCGC

Downstream 100 bases:

>100_bases
TTCATGATTGGCGATTTGCTCTTGATACTGGCGCTCTGTTTTGCGGGATTTCTGTTTTGGCAGCAGCGCCATCAAGCGGA
AATCGCCAAACAAGCGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYWNEQRQPWIWMLKFALDERGL
LQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTFKPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWD
KWHTVGLQGITDLCARLEQEQNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV
RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQPLFNQLFADVVMLPALRGVM
LPLLHASPSPELAQALEQLQQMTRG

Sequences:

>Translated_345_residues
MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYWNEQRQPWIWMLKFALDERGL
LQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTFKPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWD
KWHTVGLQGITDLCARLEQEQNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV
RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQPLFNQLFADVVMLPALRGVM
LPLLHASPSPELAQALEQLQQMTRG
>Mature_345_residues
MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYWNEQRQPWIWMLKFALDERGL
LQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTFKPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWD
KWHTVGLQGITDLCARLEQEQNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV
RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQPLFNQLFADVVMLPALRGVM
LPLLHASPSPELAQALEQLQQMTRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38782; Mature: 38782

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYW
CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHCCCCEEEEEE
NEQRQPWIWMLKFALDERGLLQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTF
CCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWDKWHTVGLQGITDLCARLEQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQ
HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCC
PLFNQLFADVVMLPALRGVMLPLLHASPSPELAQALEQLQQMTRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYW
CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHCCCCEEEEEE
NEQRQPWIWMLKFALDERGLLQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTF
CCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWDKWHTVGLQGITDLCARLEQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQ
HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCC
PLFNQLFADVVMLPALRGVMLPLLHASPSPELAQALEQLQQMTRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA