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The map label for this gene is yaeB [H]

Identifier: 227081052

GI number: 227081052

Start: 897247

End: 897942

Strand: Reverse

Name: yaeB [H]

Synonym: VCM66_0833

Alternate gene names: 227081052

Gene position: 897942-897247 (Counterclockwise)

Preceding gene: 227081053

Following gene: 227081051

Centisome position: 31.04

GC content: 48.71

Gene sequence:

>696_bases
ATGTATCCCATTGAACCTATTGCAATTATTGAAAGCCCATACCAAGAAAAATTTGCCGTACCTCGTCAACCACGTTTGGT
GCCAAGCGCGACCGCAAGAGTCAAATTGCTCGGTGAGTGCAACTGCGCGGAATCCATTCGTGGCATAGAGCAATTTAGCC
ATGTCTGGCTGCTATTTTTGTTCGACCAAAACCTCGCCGCAGGTTGGAAACCGACCGTACGTCCACCTCGTCTTGGTGGT
AATGAACGAGTGGGTGTTTTCGCTTCACGAGCAACTTTTCGCCCTAATGGAATTGGCATGTCAGCGGTCGAGTTAAAAGG
GGTAAGCAAAGAAGGCGATCAATATTATTTAGAGCTCGGAAGCGTCGACTTGGTCAATGGCACACCGATCATTGATATCA
AGCCTTATATCCCCTACTCCGATTCCATTACCGACGCGCAAGGTGGCTATGCCGAGCAAGAGCCACAACGCATGGCGGTT
ACCTTCAGTGATGCAGCGCGGCAAATGCTCCAGGCACATCCTGAAGGTAAGATTCGCCAAGCAGTGATCCGTGAAGTGTT
AGCGCAAGATCCGCGCCCAGCTTACAAAAAACATCGCGCTGACGATAAGTTATATGCGGTGAATTTGTACGATTGGAACG
TGAAATTTACGGTTAACGCTGAAGCAATCGTTGTCAACGCAATTGAACCCTTTTGA

Upstream 100 bases:

>100_bases
CATTTTAATTAATAATTATTCTCAAGGTGATTTGCAAGCGATTTTTACGTCTAGCTATGCTATTTTTTTCCTCAACATCG
TGTGAATATCGATAAAAAAC

Downstream 100 bases:

>100_bases
CAAAACCATTTGGCTGATATTATTAGCGCCCAAATTCGCTTTAGATCCCCAAACCACTTCCAGTGGCAGATAGATGACAA
GTGAGTGAATCACCATAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MYPIEPIAIIESPYQEKFAVPRQPRLVPSATARVKLLGECNCAESIRGIEQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERVGVFASRATFRPNGIGMSAVELKGVSKEGDQYYLELGSVDLVNGTPIIDIKPYIPYSDSITDAQGGYAEQEPQRMAV
TFSDAARQMLQAHPEGKIRQAVIREVLAQDPRPAYKKHRADDKLYAVNLYDWNVKFTVNAEAIVVNAIEPF

Sequences:

>Translated_231_residues
MYPIEPIAIIESPYQEKFAVPRQPRLVPSATARVKLLGECNCAESIRGIEQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERVGVFASRATFRPNGIGMSAVELKGVSKEGDQYYLELGSVDLVNGTPIIDIKPYIPYSDSITDAQGGYAEQEPQRMAV
TFSDAARQMLQAHPEGKIRQAVIREVLAQDPRPAYKKHRADDKLYAVNLYDWNVKFTVNAEAIVVNAIEPF
>Mature_231_residues
MYPIEPIAIIESPYQEKFAVPRQPRLVPSATARVKLLGECNCAESIRGIEQFSHVWLLFLFDQNLAAGWKPTVRPPRLGG
NERVGVFASRATFRPNGIGMSAVELKGVSKEGDQYYLELGSVDLVNGTPIIDIKPYIPYSDSITDAQGGYAEQEPQRMAV
TFSDAARQMLQAHPEGKIRQAVIREVLAQDPRPAYKKHRADDKLYAVNLYDWNVKFTVNAEAIVVNAIEPF

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=141, Percent_Identity=41.1347517730496, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI1786393, Length=231, Percent_Identity=52.8138528138528, Blast_Score=247, Evalue=4e-67,
Organism=Drosophila melanogaster, GI45552503, Length=167, Percent_Identity=37.7245508982036, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24586408, Length=161, Percent_Identity=38.5093167701863, Blast_Score=103, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 25805; Mature: 25805

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPIEPIAIIESPYQEKFAVPRQPRLVPSATARVKLLGECNCAESIRGIEQFSHVWLLFL
CCCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEE
FDQNLAAGWKPTVRPPRLGGNERVGVFASRATFRPNGIGMSAVELKGVSKEGDQYYLELG
ECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEECCCCCCCEEEEEEC
SVDLVNGTPIIDIKPYIPYSDSITDAQGGYAEQEPQRMAVTFSDAARQMLQAHPEGKIRQ
CEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH
AVIREVLAQDPRPAYKKHRADDKLYAVNLYDWNVKFTVNAEAIVVNAIEPF
HHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MYPIEPIAIIESPYQEKFAVPRQPRLVPSATARVKLLGECNCAESIRGIEQFSHVWLLFL
CCCCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEE
FDQNLAAGWKPTVRPPRLGGNERVGVFASRATFRPNGIGMSAVELKGVSKEGDQYYLELG
ECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEECCCCCCCEEEEEEC
SVDLVNGTPIIDIKPYIPYSDSITDAQGGYAEQEPQRMAVTFSDAARQMLQAHPEGKIRQ
CEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH
AVIREVLAQDPRPAYKKHRADDKLYAVNLYDWNVKFTVNAEAIVVNAIEPF
HHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]