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The map label for this gene is acfA

Identifier: 227081021

GI number: 227081021

Start: 863011

End: 863658

Strand: Reverse

Name: acfA

Synonym: VCM66_0801

Alternate gene names: NA

Gene position: 863658-863011 (Counterclockwise)

Preceding gene: 227081023

Following gene: 227081002

Centisome position: 29.86

GC content: 31.33

Gene sequence:

>648_bases
ATGCAAAAAACTTTATCAGCAATTTTTTTGTTTACGACTTTATCAGCAAATGCAGCACCGTATATTGGTCTTGAACTTGG
AATTGGAACAGCAAATCATAGCTTTGAGACGAACTATCAAAGTGACGCTGTTAGCCTAAACCCCAATATGGAAGATATGT
TTTTAGGTGGACTAATTGGTTATAAATTTAATGATAATTTTTCTTTTGAAATCAACTATTCAAGTTATAAATTAGAAGAT
CAATACAGTAAGTTTATAGGAATTGAATCTTTAAATAATCAACAATATAGAAAAGAGCACGAATGGAGCTCTGAGATTGA
AGCTAAACAACTTGCATTAATCTCAGTTTACTCATACCCCATTCATCAGCAATTGAAAACAAATATAAAAGTTGGTGTGA
CACATACACAATATGAAGCATATTCTGGAAAATATGAAGAGCTAGAATTACTCCTAAATGATGATATAGAGATTAGAAAA
GCTCTATTAGAAACAGGTCTTAAAAAGAATCGCTTTGGTGCACTATTTTCGTTAGGGTTGGATTATAATTTAATTCCAGA
GCTTAGCGTTGGAACAGAGTTAAGATATCAGTTCGATAAGTACAATGATGTGCTTTCTATAAGTTTAAATTCAAAGTACT
ACTTCTAG

Upstream 100 bases:

>100_bases
TGTTAAATTTATTTTTAAAAATTTAACGAGTTAGCATAAAAAAAATAAAAAATTAAAGTTAGAATAAAATGTGAAACACA
GGTAAAAATAGGAGTAAAAA

Downstream 100 bases:

>100_bases
TCTTATTGTGCATTGAGATTCGGATTCATTGCAATCCGGATCTCAATGTTAGTCAGCAATTCATCCCATTTGATTAATGG
TACTTTATTAGTAATTTCAG

Product: accessory colonization factor AcfA

Products: NA

Alternate protein names: Accessory Colonization Factor AcfA-Like Protein; Accessory Colonization Factor AcfA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIGYKFNDNFSFEINYSSYKLED
QYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYPIHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRK
ALLETGLKKNRFGALFSLGLDYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF

Sequences:

>Translated_215_residues
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIGYKFNDNFSFEINYSSYKLED
QYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYPIHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRK
ALLETGLKKNRFGALFSLGLDYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF
>Mature_215_residues
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIGYKFNDNFSFEINYSSYKLED
QYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYPIHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRK
ALLETGLKKNRFGALFSLGLDYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24698; Mature: 24698

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIG
CCHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHEEEEEEE
YKFNDNFSFEINYSSYKLEDQYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYP
EEECCCEEEEEECCEEEEHHHHHHHCCCCCCCCHHHHHHHCCHHHCCHHHEEEEEEECCC
IHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRKALLETGLKKNRFGALFSLGL
CHHHHHCCEEEEEEEEEEHHHCCCHHEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECC
DYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF
CCCCCCCCCCCCEEEEEECCCCCEEEEEECCEECC
>Mature Secondary Structure
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIG
CCHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHEEEEEEE
YKFNDNFSFEINYSSYKLEDQYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYP
EEECCCEEEEEECCEEEEHHHHHHHCCCCCCCCHHHHHHHCCHHHCCHHHEEEEEEECCC
IHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRKALLETGLKKNRFGALFSLGL
CHHHHHCCEEEEEEEEEEHHHCCCHHEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECC
DYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF
CCCCCCCCCCCCEEEEEECCCCCEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA