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The map label for this gene is tcpH [H]

Identifier: 227081004

GI number: 227081004

Start: 846948

End: 847358

Strand: Direct

Name: tcpH [H]

Synonym: VCM66_0784

Alternate gene names: 227081004

Gene position: 846948-847358 (Clockwise)

Preceding gene: 227081003

Following gene: 227081005

Centisome position: 29.28

GC content: 41.61

Gene sequence:

>411_bases
ATGCACAAAAAATTAAAAGCTTGGGGGGGCGCTACAGGTCTATTCGTTGTAGCACTTGGTGTAACGATCATCGCACTCCC
GATGCGACAAAAAAACTCGCACGGCACAATGATTATTGATGGTACAGTCACACAAATTTTTTCTACTTATCAAGGTAATC
TATCCAATGTTTGGCTTACCCAGACCGATCCACAAGGTAACGTAGTCAAAAGTTGGACTACACGTTATCAAACATTGCCA
GATCCTAGCTCTCAGAAGCTAAATTTGATTCCCGACTACTCACAAAGTAATGCTAGCCGTGATTACAATGTGTTGAGTAT
TTATCAACTCGGCAAAGGTTGTTTTCTCGCCTTCCCTTACAAGCTGCTAACGGCTGAAAAAATGTGGTTTTCCTGTCAAA
GCGATTTTTAG

Upstream 100 bases:

>100_bases
GGTTACCGGGGATAACAATCCAAAAACTGTCAGAACAAAAACTCACGTTCGCTATTGATCAACATCAGTGTTCCGTGAAT
TATGAACAGAAGACATTAGA

Downstream 100 bases:

>100_bases
GGTCTTATCATGAGCCGCCTAGATAGTCTGTGACGAGTAGGCGCTCCTCCACAGTCAAAGTGACTGAAAGTCATCTCTTC
ATCTTTACCCTAATGTTCGC

Product: toxin co-regulated pilus biosynthesis protein H

Products: NA

Alternate protein names: TCP pilus biosynthesis protein tcpH [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPYKLLTAEKMWFSCQSDF

Sequences:

>Translated_136_residues
MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPYKLLTAEKMWFSCQSDF
>Mature_136_residues
MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPYKLLTAEKMWFSCQSDF

Specific function: Involved in TCP pilus biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15231; Mature: 15231

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
CCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEE
QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
ECCCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCH
KLLTAEKMWFSCQSDF
HHHHHHHHEEEECCCC
>Mature Secondary Structure
MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
CCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEE
QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
ECCCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCH
KLLTAEKMWFSCQSDF
HHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8621096; 10952301 [H]