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The map label for this gene is tcpP

Identifier: 227081003

GI number: 227081003

Start: 846298

End: 846963

Strand: Direct

Name: tcpP

Synonym: VCM66_0783

Alternate gene names: 227081003

Gene position: 846298-846963 (Clockwise)

Preceding gene: 227081001

Following gene: 227081004

Centisome position: 29.26

GC content: 36.64

Gene sequence:

>666_bases
ATGGGGTATGTCCGCGTGATTTATCAATTTCCCGATAACCTTTGGTGGAATGAATGCACTAATCAAGTCTATTATGCACA
AGATCCAATGAAGCCAGAAAGGCTGATTGGTACACCAAGCATAATACAGACTAAGTTATTGAAAATACTCTGTGAATATC
ATCCTGCCCCCTGTCCAAATGATCAAATAATTAAAGCACTTTGGCCTCATGGATTTATCAGCTCTGAAAGTCTAACTCAG
GCAATCAAAAGAACCAGAGATTTTTTGAATGATGAACATAAGACGTTGATCGAAAATGTAAAGTTACAAGGTTATCGTAT
TAATATTATACAAGTTATTGTTTCTGAAAACGTTGTTGATGAAGCTGACTGTAGTCAAAAAAAATCAGTAAAAGAGCGGA
TAAAAATTGAGTGGGGGAAGATAAACGTAGTTCCTTATCTTGTTTTTTCGGCGCTTTATGTTGCTTTGCTACCTGTGATT
TGGTGGAGTTATGGCCAATGGTATCAACATGAATTAGCCGGCATTACTCATGATCTACGAGATTTAGCAAGGTTACCGGG
GATAACAATCCAAAAACTGTCAGAACAAAAACTCACGTTCGCTATTGATCAACATCAGTGTTCCGTGAATTATGAACAGA
AGACATTAGAATGCACAAAAAATTAA

Upstream 100 bases:

>100_bases
TAAGTTCTCATTATCAACTGCAGAATTAGATTGCAAATAATTATATTAAAAAAATAGACATAAAAAAAATGGGTAGTTAT
TATTAAGAAAATGTAAAGTA

Downstream 100 bases:

>100_bases
AAGCTTGGGGGGGCGCTACAGGTCTATTCGTTGTAGCACTTGGTGTAACGATCATCGCACTCCCGATGCGACAAAAAAAC
TCGCACGGCACAATGATTAT

Product: toxin co-regulated pilus biosynthesis protein P

Products: NA

Alternate protein names: TCP pilus biosynthesis protein tcpP

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MGYVRVIYQFPDNLWWNECTNQVYYAQDPMKPERLIGTPSIIQTKLLKILCEYHPAPCPNDQIIKALWPHGFISSESLTQ
AIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENVVDEADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVI
WWSYGQWYQHELAGITHDLRDLARLPGITIQKLSEQKLTFAIDQHQCSVNYEQKTLECTKN

Sequences:

>Translated_221_residues
MGYVRVIYQFPDNLWWNECTNQVYYAQDPMKPERLIGTPSIIQTKLLKILCEYHPAPCPNDQIIKALWPHGFISSESLTQ
AIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENVVDEADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVI
WWSYGQWYQHELAGITHDLRDLARLPGITIQKLSEQKLTFAIDQHQCSVNYEQKTLECTKN
>Mature_220_residues
GYVRVIYQFPDNLWWNECTNQVYYAQDPMKPERLIGTPSIIQTKLLKILCEYHPAPCPNDQIIKALWPHGFISSESLTQA
IKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENVVDEADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVIW
WSYGQWYQHELAGITHDLRDLARLPGITIQKLSEQKLTFAIDQHQCSVNYEQKTLECTKN

Specific function: Involved in TCP pilus biogenesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TCPP_VIBCH (P29485)

Other databases:

- EMBL:   X64098
- EMBL:   X74730
- EMBL:   AE003852
- PIR:   JC4722
- RefSeq:   NP_230474.1
- ProteinModelPortal:   P29485
- GeneID:   2614493
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0826
- TIGR:   VC_0826
- HOGENOM:   HBG739725
- OMA:   QWISNES
- ProtClustDB:   CLSK793803
- GO:   GO:0005622
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00862

Pfam domain/function: PF00486 Trans_reg_C; SSF46894 Bipartite_resp_reg_C-effector

EC number: NA

Molecular weight: Translated: 25779; Mature: 25648

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x25a4b848)-;

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYVRVIYQFPDNLWWNECTNQVYYAQDPMKPERLIGTPSIIQTKLLKILCEYHPAPCPN
CCCEEEEEECCCCCCHHHHCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
DQIIKALWPHGFISSESLTQAIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENVVD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEHHCCCCC
EADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVIWWSYGQWYQHELAGITHDLR
CCCCHHHHHHHHHHEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLARLPGITIQKLSEQKLTFAIDQHQCSVNYEQKTLECTKN
HHHHCCCCHHHHHCCCHHEEEEECCCCCCCCCHHHHEECCH
>Mature Secondary Structure 
GYVRVIYQFPDNLWWNECTNQVYYAQDPMKPERLIGTPSIIQTKLLKILCEYHPAPCPN
CCEEEEEECCCCCCHHHHCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
DQIIKALWPHGFISSESLTQAIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENVVD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEHHCCCCC
EADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVIWWSYGQWYQHELAGITHDLR
CCCCHHHHHHHHHHEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLARLPGITIQKLSEQKLTFAIDQHQCSVNYEQKTLECTKN
HHHHCCCCHHHHHCCCHHEEEEECCCCCCCCCHHHHEECCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8621096; 10952301