| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is oadG2 [H]
Identifier: 227080973
GI number: 227080973
Start: 808642
End: 809061
Strand: Reverse
Name: oadG2 [H]
Synonym: VCM66_0752
Alternate gene names: 227080973
Gene position: 809061-808642 (Counterclockwise)
Preceding gene: 227080974
Following gene: 227080972
Centisome position: 27.97
GC content: 48.57
Gene sequence:
>420_bases GTGGCGGCATTGTGCTGGTCATCGCCAGCGTCGTATTCGGAATGTTTGTTTAACCCTTTAACCCTTGCTCCTTGGGATTA TTTGGCGCGCTTAGCGCGCCTTTTTTTCTCTCCGTTTTCAACCCTGTTTTTACCACTGGAAGTGACCATGCAATCAACCT CACTGTTCCTCGAAGGGATTAATTTGCTGACGCTGGGGATGGGCTTTGTGTTCATCTTTCTGATTTTCTTGGTGTATGCC ACGCGTGCGATGTCGCAATTGATTGTGCGTTTTGCCCCGCCGGAAGTGCCAGCCAAAACCACCAATAAAAAAGCCTCTGC CAACAAGGCCAAAGCCAACCCAAATCAAAACCAAGGTGAATTGCTCGCGGTGCTCACGGCCGCTGTCCATCACCATAAAA CACAACAAAAACTATCTTAA
Upstream 100 bases:
>100_bases CTATGTATGGCTAACCGCGGCGGCTCGGGCGACCTTGAAGTGCTTGCCGCCTCTAACCGTATGAGCTTGCTCTCTTACGC ACAAATATCTTCACGTCTGG
Downstream 100 bases:
>100_bases GTGAAGGAGAAACCACAGATGACTCAGGCGATCAAACGCGTTGGTGTTACGGATGTCGTATTGCGCGATGCGCACCAATC TCTTTTTGCCACCCGTTTAC
Product: putative oxaloacetate decarboxylase gamma chain 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAALCWSSPASYSECLFNPLTLAPWDYLARLARLFFSPFSTLFLPLEVTMQSTSLFLEGINLLTLGMGFVFIFLIFLVYA TRAMSQLIVRFAPPEVPAKTTNKKASANKAKANPNQNQGELLAVLTAAVHHHKTQQKLS
Sequences:
>Translated_139_residues MAALCWSSPASYSECLFNPLTLAPWDYLARLARLFFSPFSTLFLPLEVTMQSTSLFLEGINLLTLGMGFVFIFLIFLVYA TRAMSQLIVRFAPPEVPAKTTNKKASANKAKANPNQNQGELLAVLTAAVHHHKTQQKLS >Mature_138_residues AALCWSSPASYSECLFNPLTLAPWDYLARLARLFFSPFSTLFLPLEVTMQSTSLFLEGINLLTLGMGFVFIFLIFLVYAT RAMSQLIVRFAPPEVPAKTTNKKASANKAKANPNQNQGELLAVLTAAVHHHKTQQKLS
Specific function: Lyase and sodium transporter [H]
COG id: COG3630
COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oadG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005899 [H]
Pfam domain/function: PF04277 OAD_gamma [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 15407; Mature: 15276
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALCWSSPASYSECLFNPLTLAPWDYLARLARLFFSPFSTLFLPLEVTMQSTSLFLEGI CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTLGMGFVFIFLIFLVYATRAMSQLIVRFAPPEVPAKTTNKKASANKAKANPNQNQGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLAVLTAAVHHHKTQQKLS HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AALCWSSPASYSECLFNPLTLAPWDYLARLARLFFSPFSTLFLPLEVTMQSTSLFLEGI CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLTLGMGFVFIFLIFLVYATRAMSQLIVRFAPPEVPAKTTNKKASANKAKANPNQNQGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLAVLTAAVHHHKTQQKLS HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]